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View Structure Prediction Details

Protein: STS1
Organism: Saccharomyces cerevisiae
Length: 319 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STS1.

Description E-value Query
Range
Subject
Range
gi|415401 - gi|415401|emb|CAA53515.1| Sts1p [Saccharomyces cerevisiae]
STS1_YEAS2 - Tethering factor for nuclear proteasome STS1 OS=Saccharomyces cerevisiae (strain JAY291) GN=STS1 PE=...
0.0 [1..319] [1..319]
gi|28922602, gi|... - gi|32406002|ref|XP_323614.1| hypothetical protein ( (AL513462) related to Sts1 protein [Neurospora c...
STS1_NEUCR - Tethering factor for nuclear proteasome sts1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / ...
3.0E-96 [16..269] [15..259]
CUT8_SCHPO - Tethering factor for nuclear proteasome cut8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...
cut8 - tethering factor for nuclear proteasome Cut8
5.0E-86 [36..308] [10..251]

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Predicted Domain #1
Region A:
Residues: [1-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGFEWGFKP SSKITQSTVS SQGTGNVMIP TAGVKQKRRY ANEEQEEEEL PRNKNVMKYG  60
   61 GVSKRRPQPG SLIRGQPLPL QRGMELMNKN QLQQLLVDLM TKHPEIQQSV HTRVIGLDFS 120
  121 IQKCLDMLKQ KSEAVYQSIP YNRSYESNKL DDYAFVRMKP QILEFLNCLV DFILDNIPPR 180
  181 LENLHASLKF LDICTELVIK LPRFELASNN YYYDKCIEQL SHVWCTLIEH VARDRIILLA 240
  241 DNSSVWKSHM TRLQVYNEHS NGLLERPLQL FKSLDMGSPS AASSSTLSLQ ESIIYHHDTM 300
  301 TANENNNNSG SAATDSPFN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle