| Protein: | MUC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1367 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1365] | [936..2318] |
|
|
4.0E-78 | [2..1367] | [165..1522] |
|
|
2.0E-73 | [112..1367] | [13..1259] |
|
|
2.0E-65 | [8..1366] | [1757..3146] |
|
|
3.0E-60 | [196..1132] | [6..957] |
|
|
1.0E-56 | [44..1348] | [131..1462] |
|
Region A: Residues: [1-407] |
1 11 21 31 41 51
| | | | | |
1 MQRPFLLAYL VLSLLFNSAL GFPTALVPRG SSEGTSCNSI VNGCPNLDFN WHMDQQNIMQ 60
61 YTLDVTSVSW VQDNTYQITI HVKGKENIDL KYLWSLKIIG VTGPKGTVQL YGYNENTYLI 120
121 DNPTDFTATF EVYATQDVNS CQVWMPNFQI QFEYLQGSAA QYASSWQWGT TSFDLSTGCN 180
181 NYDNQGHSQT DFPGFYWNID CDNNCGGTKS STTTSSTSES STTTSSTSES STTTSSTSES 240
241 STTTSSTSES STSSSTTAPA TPTTTSCTKE KPTPPTTTSC TKEKPTPPHH DTTPCTKKKT 300
301 TTSKTCTKKT TTPVPTPSSS TTESSSAPVP TPSSSTTESS SAPVTSSTTE SSSAPVPTPS 360
361 SSTTESSSAP VTSSTTESSS APVTSSTTES SSAPVPTPSS STTESSS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [408-1055] |
1 11 21 31 41 51
| | | | | |
1 APVTSSTTES SSAPVTSSTT ESSSAPVTSS TTESSSAPVT SSTTESSSAP VPTPSSSTTE 60
61 SSSAPVTSST TESSSAPVPT PSSSTTESSS APVTSSTTES SSAPVPTPSS STTESSSAPA 120
121 PTPSSSTTES SSAPVTSSTT ESSSAPVPTP SSSTTESSST PVTSSTTESS SAPVPTPSSS 180
181 TTESSSAPVP TPSSSTTESS SAPAPTPSSS TTESSSAPVT SSTTESSSAP VPTPSSSTTE 240
241 SSSAPVPTPS SSTTESSSAP VPTPSSSTTE SSSAPVTSST TESSSAPVTS STTESSSAPV 300
301 PTPSSSTTES SSAPVPTPSS STTESSSAPV PTPSSSTTES SSAPVTSSTT ESSSAPVPTP 360
361 SSSTTESSSA PVPTPSSSTT ESSSAPVPTP SSSTTESSVA PVPTPSSSSN ITSSAPSSTP 420
421 FSSSTESSSV PVPTPSSSTT ESSSAPVSSS TTESSVAPVP TPSSSSNITS SAPSSIPFSS 480
481 TTESFSTGTT VTPSSSKYPG SQTETSVSST TETTIVPTKT TTSVTTPSTT TITTTVCSTG 540
541 TNSAGETTSG CSPKTVTTTV PTTTTTSVTT SSTTTITTTV CSTGTNSAGE TTSGCSPKTI 600
601 TTTVPCSTSP SETASESTTT SPTTPVTTVV STTVVTTEYS TSTKPGGE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1056-1367] |
1 11 21 31 41 51
| | | | | |
1 ITTTFVTKNI PTTYLTTIAP TPSVTTVTNF TPTTITTTVC STGTNSAGET TSGCSPKTVT 60
61 TTVPCSTGTG EYTTEATTLV TTAVTTTVVT TESSTGTNSA GKTTTGYTTK SVPTTYVTTL 120
121 APSAPVTPAT NAVPTTITTT ECSAATNAAG ETTSVCSAKT IVSSASAGEN TAPSATTPVT 180
181 TAIPTTVITT ESSVGTNSAG ETTTGYTTKS IPTTYITTLI PGSNGAKNYE TVATATNPIS 240
241 IKTTSQLATT ASASSVAPVV TSPSLTGPLQ SASGSAVATY SVPSISSTYQ GAANIKVLGN 300
301 FMWLLLALPV VF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [687-976] |
1 11 21 31 41 51
| | | | | |
1 TTESSSAPVT SSTTESSSAP VPTPSSSTTE SSSAPVPTPS SSTTESSSAP VPTPSSSTTE 60
61 SSSAPVTSST TESSSAPVPT PSSSTTESSS APVPTPSSST TESSSAPVPT PSSSTTESSV 120
121 APVPTPSSSS NITSSAPSST PFSSSTESSS VPVPTPSSST TESSSAPVSS STTESSVAPV 180
181 PTPSSSSNIT SSAPSSIPFS STTESFSTGT TVTPSSSKYP GSQTETSVSS TTETTIVPTK 240
241 TTTSVTTPST TTITTTVCST GTNSAGETTS GCSPKTVTTT VPTTTTTSVT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [977-1035] |
1 11 21 31 41 51
| | | | | |
1 TSSTTTITTT VCSTGTNSAG ETTSGCSPKT ITTTVPCSTS PSETASESTT TSPTTPVTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1036-1244] |
1 11 21 31 41 51
| | | | | |
1 VVSTTVVTTE YSTSTKPGGE ITTTFVTKNI PTTYLTTIAP TPSVTTVTNF TPTTITTTVC 60
61 STGTNSAGET TSGCSPKTVT TTVPCSTGTG EYTTEATTLV TTAVTTTVVT TESSTGTNSA 120
121 GKTTTGYTTK SVPTTYVTTL APSAPVTPAT NAVPTTITTT ECSAATNAAG ETTSVCSAKT 180
181 IVSSASAGEN TAPSATTPVT TAIPTTVIT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1245-1367] |
1 11 21 31 41 51
| | | | | |
1 TESSVGTNSA GETTTGYTTK SIPTTYITTL IPGSNGAKNY ETVATATNPI SIKTTSQLAT 60
61 TASASSVAPV VTSPSLTGPL QSASGSAVAT YSVPSISSTY QGAANIKVLG NFMWLLLALP 120
121 VVF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
