Protein: | MUC1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1367 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUC1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1365] | [936..2318] |
|
4.0E-78 | [2..1367] | [165..1522] |
|
2.0E-73 | [112..1367] | [13..1259] |
|
2.0E-65 | [8..1366] | [1757..3146] |
|
3.0E-60 | [196..1132] | [6..957] |
|
1.0E-56 | [44..1348] | [131..1462] |
Region A: Residues: [1-407] |
1 11 21 31 41 51 | | | | | | 1 MQRPFLLAYL VLSLLFNSAL GFPTALVPRG SSEGTSCNSI VNGCPNLDFN WHMDQQNIMQ 60 61 YTLDVTSVSW VQDNTYQITI HVKGKENIDL KYLWSLKIIG VTGPKGTVQL YGYNENTYLI 120 121 DNPTDFTATF EVYATQDVNS CQVWMPNFQI QFEYLQGSAA QYASSWQWGT TSFDLSTGCN 180 181 NYDNQGHSQT DFPGFYWNID CDNNCGGTKS STTTSSTSES STTTSSTSES STTTSSTSES 240 241 STTTSSTSES STSSSTTAPA TPTTTSCTKE KPTPPTTTSC TKEKPTPPHH DTTPCTKKKT 300 301 TTSKTCTKKT TTPVPTPSSS TTESSSAPVP TPSSSTTESS SAPVTSSTTE SSSAPVPTPS 360 361 SSTTESSSAP VTSSTTESSS APVTSSTTES SSAPVPTPSS STTESSS |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [408-1055] |
1 11 21 31 41 51 | | | | | | 1 APVTSSTTES SSAPVTSSTT ESSSAPVTSS TTESSSAPVT SSTTESSSAP VPTPSSSTTE 60 61 SSSAPVTSST TESSSAPVPT PSSSTTESSS APVTSSTTES SSAPVPTPSS STTESSSAPA 120 121 PTPSSSTTES SSAPVTSSTT ESSSAPVPTP SSSTTESSST PVTSSTTESS SAPVPTPSSS 180 181 TTESSSAPVP TPSSSTTESS SAPAPTPSSS TTESSSAPVT SSTTESSSAP VPTPSSSTTE 240 241 SSSAPVPTPS SSTTESSSAP VPTPSSSTTE SSSAPVTSST TESSSAPVTS STTESSSAPV 300 301 PTPSSSTTES SSAPVPTPSS STTESSSAPV PTPSSSTTES SSAPVTSSTT ESSSAPVPTP 360 361 SSSTTESSSA PVPTPSSSTT ESSSAPVPTP SSSTTESSVA PVPTPSSSSN ITSSAPSSTP 420 421 FSSSTESSSV PVPTPSSSTT ESSSAPVSSS TTESSVAPVP TPSSSSNITS SAPSSIPFSS 480 481 TTESFSTGTT VTPSSSKYPG SQTETSVSST TETTIVPTKT TTSVTTPSTT TITTTVCSTG 540 541 TNSAGETTSG CSPKTVTTTV PTTTTTSVTT SSTTTITTTV CSTGTNSAGE TTSGCSPKTI 600 601 TTTVPCSTSP SETASESTTT SPTTPVTTVV STTVVTTEYS TSTKPGGE |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1056-1367] |
1 11 21 31 41 51 | | | | | | 1 ITTTFVTKNI PTTYLTTIAP TPSVTTVTNF TPTTITTTVC STGTNSAGET TSGCSPKTVT 60 61 TTVPCSTGTG EYTTEATTLV TTAVTTTVVT TESSTGTNSA GKTTTGYTTK SVPTTYVTTL 120 121 APSAPVTPAT NAVPTTITTT ECSAATNAAG ETTSVCSAKT IVSSASAGEN TAPSATTPVT 180 181 TAIPTTVITT ESSVGTNSAG ETTTGYTTKS IPTTYITTLI PGSNGAKNYE TVATATNPIS 240 241 IKTTSQLATT ASASSVAPVV TSPSLTGPLQ SASGSAVATY SVPSISSTYQ GAANIKVLGN 300 301 FMWLLLALPV VF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [687-976] |
1 11 21 31 41 51 | | | | | | 1 TTESSSAPVT SSTTESSSAP VPTPSSSTTE SSSAPVPTPS SSTTESSSAP VPTPSSSTTE 60 61 SSSAPVTSST TESSSAPVPT PSSSTTESSS APVPTPSSST TESSSAPVPT PSSSTTESSV 120 121 APVPTPSSSS NITSSAPSST PFSSSTESSS VPVPTPSSST TESSSAPVSS STTESSVAPV 180 181 PTPSSSSNIT SSAPSSIPFS STTESFSTGT TVTPSSSKYP GSQTETSVSS TTETTIVPTK 240 241 TTTSVTTPST TTITTTVCST GTNSAGETTS GCSPKTVTTT VPTTTTTSVT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [977-1035] |
1 11 21 31 41 51 | | | | | | 1 TSSTTTITTT VCSTGTNSAG ETTSGCSPKT ITTTVPCSTS PSETASESTT TSPTTPVTT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1036-1244] |
1 11 21 31 41 51 | | | | | | 1 VVSTTVVTTE YSTSTKPGGE ITTTFVTKNI PTTYLTTIAP TPSVTTVTNF TPTTITTTVC 60 61 STGTNSAGET TSGCSPKTVT TTVPCSTGTG EYTTEATTLV TTAVTTTVVT TESSTGTNSA 120 121 GKTTTGYTTK SVPTTYVTTL APSAPVTPAT NAVPTTITTT ECSAATNAAG ETTSVCSAKT 180 181 IVSSASAGEN TAPSATTPVT TAIPTTVIT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1245-1367] |
1 11 21 31 41 51 | | | | | | 1 TESSVGTNSA GETTTGYTTK SIPTTYITTL IPGSNGAKNY ETVATATNPI SIKTTSQLAT 60 61 TASASSVAPV VTSPSLTGPL QSASGSAVAT YSVPSISSTY QGAANIKVLG NFMWLLLALP 120 121 VVF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.