Protein: | UBX6 |
Organism: | Saccharomyces cerevisiae |
Length: | 396 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBX6.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..396] | [1..396] |
|
2.0E-46 | [9..259] | [232..507] |
|
7.0E-46 | [7..268] | [147..490] |
|
2.0E-43 | [14..261] | [160..422] |
|
2.0E-41 | [1..264] | [1..291] |
Region A: Residues: [1-67] |
1 11 21 31 41 51 | | | | | | 1 MYEMSGIDSL FHDRVVHDYS HTSEQVIVVY ISSAAGDNSW LHQWFKPGNL SDEERENILW 60 61 VRLVNGT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [68-184] |
1 11 21 31 41 51 | | | | | | 1 KECLLFKSIF PSSSAPSINI LQNGLLECSI QGNSLSREQD PWETFINGLQ SVFKGQVTKR 60 61 KLFSKSNEEY QRVKRMIQND KLERKYVFQN TNDPQRKPQK WKQLTVTDNV SYKSQKG |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [185-302] |
1 11 21 31 41 51 | | | | | | 1 FLAQNYCTLQ LKLPNGYTIS NTFPPQTKLH KVRMWLDYNC YDDGTPYLFH RNIPRVTLTR 60 61 NDELKSLQEL DLLPRSTLIL EPLEANNKTF DYMEQSSLLH KVYSGLTSFW AKEPEVDA |
Detection Method: | |
Confidence: | 17.69897 |
Match: | 1h8cA_ |
Description: | Fas-assosiated factor 1, Faf1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [303-396] |
1 11 21 31 41 51 | | | | | | 1 SSSRLGYQRL GTNVSNSANY SLQKLSSLDM VSDGGGGGGG DSMTPSAYTT PRMYPSNGTS 60 61 QLRQNVSELN LSSNNSASNT KVRTLGYSNN NGNN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.