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View Structure Prediction Details

Protein: YJR023C
Organism: Saccharomyces cerevisiae
Length: 133 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR023C.

Description E-value Query
Range
Subject
Range
gi|854597 - gi|854597|emb|CAA60946.1| ORF YJR83.19 [Saccharomyces cerevisiae]
119.0 [0..31] [133..30]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYILLYMVL LLLLLLLLLL LLLLLLLLQL YYFVFDSYTF SHITCSFSIL FLVSFSIGTF  60
   61 FSSIGARLSS FSASMRPTRA ISLPRSNCAL QMNSLLMRLK TLVMNRLVFL SKPFRLAMRH 120
  121 SPSTLIITTL LFK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.972 a.7.12 Description not found.
View Download 0.967 a.7.8 GAT domain
View Download 0.963 a.47.2 t-snare proteins
View Download 0.963 a.47.2 t-snare proteins
View Download 0.954 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.936 a.47.5 Description not found.
View Download 0.922 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.865 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.850 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.821 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle