| Protein: | HIR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1648 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIR3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1255] | [1..1255] |
|
|
0.0 | [546..1643] | [521..1581] |
|
Region A: Residues: [1-521] |
1 11 21 31 41 51
| | | | | |
1 MSMFNALNSN IEGEQYEAEE HSRELQIEQS FNILQDALID LKNKDFEKSD SKFQELFQID 60
61 VVKPDRWGMY RNSSPTLDNL RYLCYRNRGM YYHLYLENNY ERLNSQELVN CILKAVENLV 120
121 ESIQHSDADF AVTDLLARIF KSFNSVKLER LISEYEFTKQ ENLSLLLGRH RKFLLNDLTL 180
181 MMNNYVELTN KLLVPNLSDN TIFERYHLEK YKDIKPEPLA FGPILSRISE MKKQDEEIMK 240
241 KLDVFNVTLN EESWDEVAKA LKNLLPSVKT SSLIGRNMDP YNEIEEPIEA VKFELSEAIN 300
301 NTPSLDRESE RQEEEQDNES VRADDKSGNL APSDIQTNEE ARPNKRTDEH IDSTKPLQRS 360
361 SKRFKEREQE NSKELVMDVH KRFFGEFNTL LSYIHILPFC DFDTFASKFI IGSSDKQPEK 420
421 FIPYTDLYEC LKSWSSRYTD IFNQNDYLSS GSNENEELFQ LNALLKSNAF DDKESFPRYL 480
481 NDLDSDHIRS FISEVNAGNL HFHQVRLKLL FKLLGTYDEG N
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.64850159998065 | bayes_pls_golite062009 |
| transcription regulator activity | 2.36976362065221 | bayes_pls_golite062009 |
| nucleic acid binding | 2.05265117445838 | bayes_pls_golite062009 |
| DNA binding | 1.96740629247708 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 1.62975924741087 | bayes_pls_golite062009 |
| protein binding | 1.51322932625387 | bayes_pls_golite062009 |
| transcription factor activity | 1.22524361832616 | bayes_pls_golite062009 |
| transcription factor binding | 0.447234745044969 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.201108481303385 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.0645101607447045 | bayes_pls_golite062009 |
| transcription activator activity | 0.0514451541233234 | bayes_pls_golite062009 |
|
Region A: Residues: [522-1648] |
1 11 21 31 41 51
| | | | | |
1 GRRLIIDYLW ESQLLKIVLW FVFGIESNIF ALINKNKRQC KYLALSIYEL LVNHLGNIVE 60
61 EITNKRIQGH KSADLKSQRN KVEKRIRSWH TLLEQIADEK DKELYVHFQW THYCFLQYTC 120
121 DIVDSRLSET LTSLENTIKD SDSSLDIAYP NYRHIPALNL NTVQSQKRKI RIIQNITVED 180
181 ISEDTNSDTH SENHLETLEK VLLHILHPST NHSNIDEEMV SFIFNSPFLL KIRLWGVLFS 240
241 SYVKKSSIQD VQRIYFHVLD FMKGALTSPV YKESNPHGRH QMLLTVLTAI GYLSSQLTAI 300
301 LNSNRWESSD FVLEDYMFEK LLQTFFFFYT VLFYESSAVN DVSNKSFFKR ASKSSGKMKD 360
361 IMIDLATLIL YYYDLQAKLR TPAEQGIETT ELIWSLHTLF GHFHFCDASN GKFLDLAEKL 420
421 LCQFINNDSF LQLKQILWCR YHYAIASDNF SPDLHDTKAV EMEKIHSLPL GTYLIKLQYQ 480
481 NKNPYLSSSK TTLKQIMDNI IEKIGDPSTL DNHIISRNSF LLNEYLSRPI TADLLKHTFS 540
541 GATSLYLTSP NDELQQGMTA GLFYVSSLQS LGLYKMRKKS MQARPSELDS IIRMLKNDII 600
601 YNTNRFESWI LLGKCYSYIV EDDLIWTSDK ITVPEKKDVI ALTQRKAILC YLMAISIYYS 660
661 KLDRTIDDKK IILEALDDLG SMLISGYYNP MNKLCFSWKS SAENTMRLSE TGEVVMEKTK 720
721 KITTISDFNI EQSIFLCFNR ACSLSGDIKS QDDVFVLNWS SFYNLAKFFF KTDGGNNCKL 780
781 VAKYITQGCQ IAYESSPAKD PIIEPHYLLV NACYKWVKRG VIGVNEALTL LSKDNQFFQE 840
841 QEEFWVNDEG LAWDYQEKFF FDKIIRLLRH LLSVDKKKWQ HRPRYRIARI LFDDLGDVNG 900
901 ALEEMDSLIS AKSINKNLVN IWKPDFERPG KHFIYTYQYL VLYLDLLFAI KDFNTTGLVI 960
961 KKLRRFGSGT VNVNELLERA INVYTQSAKI KLQLQDKSYV EQILPTLNYQ EFLKISEQLN1020
1021 QVFDQGKYPE EISSGLKLAF QLKKGHSGIA FDSVCLGIYF EYLYFPLARQ DQSLTDVNDE1080
1081 NNPALPSSGS VTSKSTPDPT SKPSAIKKRV TKKEVFDRVR LLVDKIT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [498-559] |
1 11 21 31 41 51
| | | | | |
1 GNLHFHQVRL KLLFKLLGTY DEGNGRRLII DYLWESQLLK IVLWFVFGIE SNIFALINKN 60
61 KR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [560-733] |
1 11 21 31 41 51
| | | | | |
1 QCKYLALSIY ELLVNHLGNI VEEITNKRIQ GHKSADLKSQ RNKVEKRIRS WHTLLEQIAD 60
61 EKDKELYVHF QWTHYCFLQY TCDIVDSRLS ETLTSLENTI KDSDSSLDIA YPNYRHIPAL 120
121 NLNTVQSQKR KIRIIQNITV EDISEDTNSD THSENHLETL EKVLLHILHP STNH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [734-909] |
1 11 21 31 41 51
| | | | | |
1 SNIDEEMVSF IFNSPFLLKI RLWGVLFSSY VKKSSIQDVQ RIYFHVLDFM KGALTSPVYK 60
61 ESNPHGRHQM LLTVLTAIGY LSSQLTAILN SNRWESSDFV LEDYMFEKLL QTFFFFYTVL 120
121 FYESSAVNDV SNKSFFKRAS KSSGKMKDIM IDLATLILYY YDLQAKLRTP AEQGIE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [910-1027] |
1 11 21 31 41 51
| | | | | |
1 TTELIWSLHT LFGHFHFCDA SNGKFLDLAE KLLCQFINND SFLQLKQILW CRYHYAIASD 60
61 NFSPDLHDTK AVEMEKIHSL PLGTYLIKLQ YQNKNPYLSS SKTTLKQIMD NIIEKIGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1028-1247] |
1 11 21 31 41 51
| | | | | |
1 PSTLDNHIIS RNSFLLNEYL SRPITADLLK HTFSGATSLY LTSPNDELQQ GMTAGLFYVS 60
61 SLQSLGLYKM RKKSMQARPS ELDSIIRMLK NDIIYNTNRF ESWILLGKCY SYIVEDDLIW 120
121 TSDKITVPEK KDVIALTQRK AILCYLMAIS IYYSKLDRTI DDKKIILEAL DDLGSMLISG 180
181 YYNPMNKLCF SWKSSAENTM RLSETGEVVM EKTKKITTIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1248-1355] |
1 11 21 31 41 51
| | | | | |
1 DFNIEQSIFL CFNRACSLSG DIKSQDDVFV LNWSSFYNLA KFFFKTDGGN NCKLVAKYIT 60
61 QGCQIAYESS PAKDPIIEPH YLLVNACYKW VKRGVIGVNE ALTLLSKD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1356-1648] |
1 11 21 31 41 51
| | | | | |
1 NQFFQEQEEF WVNDEGLAWD YQEKFFFDKI IRLLRHLLSV DKKKWQHRPR YRIARILFDD 60
61 LGDVNGALEE MDSLISAKSI NKNLVNIWKP DFERPGKHFI YTYQYLVLYL DLLFAIKDFN 120
121 TTGLVIKKLR RFGSGTVNVN ELLERAINVY TQSAKIKLQL QDKSYVEQIL PTLNYQEFLK 180
181 ISEQLNQVFD QGKYPEEISS GLKLAFQLKK GHSGIAFDSV CLGIYFEYLY FPLARQDQSL 240
241 TDVNDENNPA LPSSGSVTSK STPDPTSKPS AIKKRVTKKE VFDRVRLLVD KIT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
