Protein: | HIR3 |
Organism: | Saccharomyces cerevisiae |
Length: | 1648 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIR3.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1255] | [1..1255] |
|
0.0 | [546..1643] | [521..1581] |
Region A: Residues: [1-521] |
1 11 21 31 41 51 | | | | | | 1 MSMFNALNSN IEGEQYEAEE HSRELQIEQS FNILQDALID LKNKDFEKSD SKFQELFQID 60 61 VVKPDRWGMY RNSSPTLDNL RYLCYRNRGM YYHLYLENNY ERLNSQELVN CILKAVENLV 120 121 ESIQHSDADF AVTDLLARIF KSFNSVKLER LISEYEFTKQ ENLSLLLGRH RKFLLNDLTL 180 181 MMNNYVELTN KLLVPNLSDN TIFERYHLEK YKDIKPEPLA FGPILSRISE MKKQDEEIMK 240 241 KLDVFNVTLN EESWDEVAKA LKNLLPSVKT SSLIGRNMDP YNEIEEPIEA VKFELSEAIN 300 301 NTPSLDRESE RQEEEQDNES VRADDKSGNL APSDIQTNEE ARPNKRTDEH IDSTKPLQRS 360 361 SKRFKEREQE NSKELVMDVH KRFFGEFNTL LSYIHILPFC DFDTFASKFI IGSSDKQPEK 420 421 FIPYTDLYEC LKSWSSRYTD IFNQNDYLSS GSNENEELFQ LNALLKSNAF DDKESFPRYL 480 481 NDLDSDHIRS FISEVNAGNL HFHQVRLKLL FKLLGTYDEG N |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
binding | 2.64850159998065 | bayes_pls_golite062009 |
transcription regulator activity | 2.36976362065221 | bayes_pls_golite062009 |
nucleic acid binding | 2.05265117445838 | bayes_pls_golite062009 |
DNA binding | 1.96740629247708 | bayes_pls_golite062009 |
transcription elongation regulator activity | 1.62975924741087 | bayes_pls_golite062009 |
protein binding | 1.51322932625387 | bayes_pls_golite062009 |
transcription factor activity | 1.22524361832616 | bayes_pls_golite062009 |
transcription factor binding | 0.447234745044969 | bayes_pls_golite062009 |
transcription cofactor activity | 0.201108481303385 | bayes_pls_golite062009 |
transcription coactivator activity | 0.0645101607447045 | bayes_pls_golite062009 |
transcription activator activity | 0.0514451541233234 | bayes_pls_golite062009 |
Region A: Residues: [522-1648] |
1 11 21 31 41 51 | | | | | | 1 GRRLIIDYLW ESQLLKIVLW FVFGIESNIF ALINKNKRQC KYLALSIYEL LVNHLGNIVE 60 61 EITNKRIQGH KSADLKSQRN KVEKRIRSWH TLLEQIADEK DKELYVHFQW THYCFLQYTC 120 121 DIVDSRLSET LTSLENTIKD SDSSLDIAYP NYRHIPALNL NTVQSQKRKI RIIQNITVED 180 181 ISEDTNSDTH SENHLETLEK VLLHILHPST NHSNIDEEMV SFIFNSPFLL KIRLWGVLFS 240 241 SYVKKSSIQD VQRIYFHVLD FMKGALTSPV YKESNPHGRH QMLLTVLTAI GYLSSQLTAI 300 301 LNSNRWESSD FVLEDYMFEK LLQTFFFFYT VLFYESSAVN DVSNKSFFKR ASKSSGKMKD 360 361 IMIDLATLIL YYYDLQAKLR TPAEQGIETT ELIWSLHTLF GHFHFCDASN GKFLDLAEKL 420 421 LCQFINNDSF LQLKQILWCR YHYAIASDNF SPDLHDTKAV EMEKIHSLPL GTYLIKLQYQ 480 481 NKNPYLSSSK TTLKQIMDNI IEKIGDPSTL DNHIISRNSF LLNEYLSRPI TADLLKHTFS 540 541 GATSLYLTSP NDELQQGMTA GLFYVSSLQS LGLYKMRKKS MQARPSELDS IIRMLKNDII 600 601 YNTNRFESWI LLGKCYSYIV EDDLIWTSDK ITVPEKKDVI ALTQRKAILC YLMAISIYYS 660 661 KLDRTIDDKK IILEALDDLG SMLISGYYNP MNKLCFSWKS SAENTMRLSE TGEVVMEKTK 720 721 KITTISDFNI EQSIFLCFNR ACSLSGDIKS QDDVFVLNWS SFYNLAKFFF KTDGGNNCKL 780 781 VAKYITQGCQ IAYESSPAKD PIIEPHYLLV NACYKWVKRG VIGVNEALTL LSKDNQFFQE 840 841 QEEFWVNDEG LAWDYQEKFF FDKIIRLLRH LLSVDKKKWQ HRPRYRIARI LFDDLGDVNG 900 901 ALEEMDSLIS AKSINKNLVN IWKPDFERPG KHFIYTYQYL VLYLDLLFAI KDFNTTGLVI 960 961 KKLRRFGSGT VNVNELLERA INVYTQSAKI KLQLQDKSYV EQILPTLNYQ EFLKISEQLN1020 1021 QVFDQGKYPE EISSGLKLAF QLKKGHSGIA FDSVCLGIYF EYLYFPLARQ DQSLTDVNDE1080 1081 NNPALPSSGS VTSKSTPDPT SKPSAIKKRV TKKEVFDRVR LLVDKIT |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [498-559] |
1 11 21 31 41 51 | | | | | | 1 GNLHFHQVRL KLLFKLLGTY DEGNGRRLII DYLWESQLLK IVLWFVFGIE SNIFALINKN 60 61 KR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [560-733] |
1 11 21 31 41 51 | | | | | | 1 QCKYLALSIY ELLVNHLGNI VEEITNKRIQ GHKSADLKSQ RNKVEKRIRS WHTLLEQIAD 60 61 EKDKELYVHF QWTHYCFLQY TCDIVDSRLS ETLTSLENTI KDSDSSLDIA YPNYRHIPAL 120 121 NLNTVQSQKR KIRIIQNITV EDISEDTNSD THSENHLETL EKVLLHILHP STNH |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [734-909] |
1 11 21 31 41 51 | | | | | | 1 SNIDEEMVSF IFNSPFLLKI RLWGVLFSSY VKKSSIQDVQ RIYFHVLDFM KGALTSPVYK 60 61 ESNPHGRHQM LLTVLTAIGY LSSQLTAILN SNRWESSDFV LEDYMFEKLL QTFFFFYTVL 120 121 FYESSAVNDV SNKSFFKRAS KSSGKMKDIM IDLATLILYY YDLQAKLRTP AEQGIE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [910-1027] |
1 11 21 31 41 51 | | | | | | 1 TTELIWSLHT LFGHFHFCDA SNGKFLDLAE KLLCQFINND SFLQLKQILW CRYHYAIASD 60 61 NFSPDLHDTK AVEMEKIHSL PLGTYLIKLQ YQNKNPYLSS SKTTLKQIMD NIIEKIGD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1028-1247] |
1 11 21 31 41 51 | | | | | | 1 PSTLDNHIIS RNSFLLNEYL SRPITADLLK HTFSGATSLY LTSPNDELQQ GMTAGLFYVS 60 61 SLQSLGLYKM RKKSMQARPS ELDSIIRMLK NDIIYNTNRF ESWILLGKCY SYIVEDDLIW 120 121 TSDKITVPEK KDVIALTQRK AILCYLMAIS IYYSKLDRTI DDKKIILEAL DDLGSMLISG 180 181 YYNPMNKLCF SWKSSAENTM RLSETGEVVM EKTKKITTIS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1248-1355] |
1 11 21 31 41 51 | | | | | | 1 DFNIEQSIFL CFNRACSLSG DIKSQDDVFV LNWSSFYNLA KFFFKTDGGN NCKLVAKYIT 60 61 QGCQIAYESS PAKDPIIEPH YLLVNACYKW VKRGVIGVNE ALTLLSKD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1356-1648] |
1 11 21 31 41 51 | | | | | | 1 NQFFQEQEEF WVNDEGLAWD YQEKFFFDKI IRLLRHLLSV DKKKWQHRPR YRIARILFDD 60 61 LGDVNGALEE MDSLISAKSI NKNLVNIWKP DFERPGKHFI YTYQYLVLYL DLLFAIKDFN 120 121 TTGLVIKKLR RFGSGTVNVN ELLERAINVY TQSAKIKLQL QDKSYVEQIL PTLNYQEFLK 180 181 ISEQLNQVFD QGKYPEEISS GLKLAFQLKK GHSGIAFDSV CLGIYFEYLY FPLARQDQSL 240 241 TDVNDENNPA LPSSGSVTSK STPDPTSKPS AIKKRVTKKE VFDRVRLLVD KIT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.