| Protein: | FAS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2051 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1979] | [1..1979] |
|
|
0.0 | [4..2051] | [9..2073] |
|
|
0.0 | [7..2049] | [5..2037] |
|
|
0.0 | [3..2049] | [2..2048] |
|
|
0.0 | [1..2051] | [1..2051] |
|
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0.0 | [5..2051] | [10..2062] |
|
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0.0 | [4..2051] | [9..2073] |
|
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0.0 | [7..2051] | [5..2060] |
|
|
0.0 | [142..2047] | [3..1912] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MDAYSTRPLT LSHGSLEHVL LVPTASFFIA SQLQEQFNKI LPEPTEGFAA DDEPTTPAEL 60
61 VGKFLGYVSS LVEPSKVGQF DQVLNLCLTE FENCYLEGND IHALAAKLLQ ENDTTLVKTK 120
121 ELIKNYITAR IMAKRPFD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-552] |
1 11 21 31 41 51
| | | | | |
1 KKSNSALFRA VGEGNAQLVA IFGGQGNTDD YFEELRDLYQ TYHVLVGDLI KFSAETLSEL 60
61 IRTTLDAEKV FTQGLNILEW LENPSNTPDK DYLLSIPISC PLIGVIQLAH YVVTAKLLGF 120
121 TPGELRSYLK GATGHSQGLV TAVAIAETDS WESFFVSVRK AITVLFFIGV RCYEAYPNTS 180
181 LPPSILEDSL ENNEGVPSPM LSISNLTQEQ VQDYVNKTNS HLPAGKQVEI SLVNGAKNLV 240
241 VSGPPQSLYG LNLTLRKAKA PSGLDQSRIP FSERKLKFSN RFLPVASPFH SHLLVPASDL 300
301 INKDLVKNNV SFNAKDIQIP VYDTFDGSDL RVLSGSISER IVDCIIRLPV KWETTTQFKA 360
361 THILDFGPGG ASGLGVLTHR NKDGTGVRVI VAGTLDINPD DDYGFKQEIF DVTS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [553-645] |
1 11 21 31 41 51
| | | | | |
1 NGLKKNPNWL EEYHPKLIKN KSGKIFVETK FSKLIGRPPL LVPGMTPCTV SPDFVAATTN 60
61 AGYTIELAGG GYFSAAGMTA AIDSVVSQIE KGS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [646-839] |
1 11 21 31 41 51
| | | | | |
1 TFGINLIYVN PFMLQWGIPL IKELRSKGYP IQFLTIGAGV PSLEVASEYI ETLGLKYLGL 60
61 KPGSIDAISQ VINIAKAHPN FPIALQWTGG RGGGHHSFED AHTPMLQMYS KIRRHPNIML 120
121 IFGSGFGSAD DTYPYLTGEW STKFDYPPMP FDGFLFGSRV MIAKEVKTSP DAKKCIAACT 180
181 GVPDDKWEQT YKKP
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1eepA_ |
| Description: | Inosine monophosphate dehydrogenase (IMPDH) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [840-1276] |
1 11 21 31 41 51
| | | | | |
1 TGGIVTVRSE MGEPIHKIAT RGVMLWKEFD ETIFNLPKNK LVPTLEAKRD YIISRLNADF 60
61 QKPWFATVNG QARDLATMTY EEVAKRLVEL MFIRSTNSWF DVTWRTFTGD FLRRVEERFT 120
121 KSKTLSLIQS YSLLDKPDEA IEKVFNAYPA AREQFLNAQD IDHFLSMCQN PMQKPVPFVP 180
181 VLDRRFEIFF KKDSLWQSEH LEAVVDQDVQ RTCILHGPVA AQFTKVIDEP IKSIMDGIHD 240
241 GHIKKLLHQY YGDDESKIPA VEYFGGESPV DVQSQVDSSS VSEDSAVFKA TSSTDEESWF 300
301 KALAGSEINW RHASFLCSFI TQDKMFVSNP IRKVFKPSQG MVVEISNGNT SSKTVVTLSE 360
361 PVQGELKPTV ILKLLKENII QMEMIENRTM DGKPVSLPLL YNFNPDNGFA PISEVMEDRN 420
421 QRIKEMYWKL WIDEPFN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1277-1646] |
1 11 21 31 41 51
| | | | | |
1 LDFDPRDVIK GKDFEITAKE VYDFTHAVGN NCEDFVSRPD RTMLAPMDFA IVVGWRAIIK 60
61 AIFPNTVDGD LLKLVHLSNG YKMIPGAKPL QVGDVVSTTA VIESVVNQPT GKIVDVVGTL 120
121 SRNGKPVMEV TSSFFYRGNY TDFENTFQKT VEPVYQMHIK TSKDIAVLRS KEWFQLDDED 180
181 FDLLNKTLTF ETETEVTFKN ANIFSSVKCF GPIKVELPTK ETVEIGIVDY EAGASHGNPV 240
241 VDFLKRNGST LEQKVNLENP IPIAVLDSYT PSTNEPYARV SGDLNPIHVS RHFASYANLP 300
301 GTITHGMFSS ASVRALIENW AADSVSSRVR GYTCQFVDMV LPNTALKTSI QHVGMINGRK 360
361 LIKFETRNED
|
| Detection Method: | |
| Confidence: | 21.39794 |
| Match: | 1b3nA_ |
| Description: | Beta-ketoacyl-ACP synthase II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1647-1713] |
1 11 21 31 41 51
| | | | | |
1 DVVVLTGEAE IEQPVTTFVF TGQGSQEQGM GMDLYKTSKA AQDVWNRADN HFKDTYGFSI 60
61 LDIVINN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1714-2051] |
1 11 21 31 41 51
| | | | | |
1 PVNLTIHFGG EKGKRIRENY SAMIFETIVD GKLKTEKIFK EINEHSTSYT FRSEKGLLSA 60
61 TQFTQPALTL MEKAAFEDLK SKGLIPADAT FAGHSLGEYA ALASLADVMS IESLVEVVFY 120
121 RGMTMQVAVP RDELGRSNYG MIAINPGRVA ASFSQEALQY VVERVGKRTG WLVEIVNYNV 180
181 ENQQYVAAGD LRALDTVTNV LNFIKLQKID IIELQKSLSL EEVEGHLFEI IDEASKKSAV 240
241 KPRPLKLERG FACIPLVGIS VPFHSTYLMN GVKPFKSFLK KNIIKENVKV ARLAGKYIPN 300
301 LTAKPFQVTK EYFQDVYDLT GSEPIKEIID NWEKYEQS
|
| Detection Method: | |
| Confidence: | 100.201249 |
| Match: | 1mla__ |
| Description: | Catalytic domain of malonyl-CoA ACP transacylase FabD; Probable ACP-binding domain of malonyl-CoA ACP transacylase |
Matching Structure (courtesy of the PDB): |
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