Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL222C.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..705] | [1..705] |
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5.0E-77 | [1..480] | [1..490] |
|
|
7.0E-75 | [1..480] | [1..492] |
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9.0E-74 | [1..480] | [1..493] |
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5.0E-72 | [1..480] | [1..487] |
|
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4.0E-69 | [5..563] | [20..603] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MKNTELSQKK KLDRQSRRKP AKSCHFCRVR KLKCDRVRPF CGSCSSRNRK QCEYKENTSA 60
61 MEDQLRKKYR RCSKLEMARR IEELESQLTK QSQPN
|
| Detection Method: |  |
| Confidence: | 54.94696 |
| Match: | 1hwtD_ |
| Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.98081393153291 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.93914501897006 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 2.44382866473054 | bayes_pls_golite062009 |
| transcription activator activity | 2.24483536326713 | bayes_pls_golite062009 |
|
Region A: Residues: [96-208] |
1 11 21 31 41 51
| | | | | |
1 IHEGQNPLSN MRYLSSKHNR HILYGPTSYR AILATQTDTF AKYREEIWQV LKLSRNNWKR 60
61 EHHYSTLSEI SSIETAPPHS GSPSVIEYLC ESLPNYEVLC EYLTDFFASD FYD
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.677 | a.1.1 | Globin-like |
| View | Download | 0.639 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.537 | a.118.8 | TPR-like |
| View | Download | 0.530 | a.118.1 | ARM repeat |
| View | Download | 0.491 | a.26.1 | 4-helical cytokines |
| View | Download | 0.478 | a.1.1 | Globin-like |
| View | Download | 0.426 | a.1.1 | Globin-like |
| View | Download | 0.380 | d.168.1 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |
| View | Download | 0.377 | a.7.1 | Spectrin repeat |
| View | Download | 0.377 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.377 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.349 | a.59.1 | PAH2 domain |
| View | Download | 0.347 | d.110.4 | SNARE-like |
| View | Download | 0.346 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.343 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.330 | d.92.2 | beta-N-acetylhexosaminidase-like domain |
| View | Download | 0.326 | a.26.1 | 4-helical cytokines |
| View | Download | 0.320 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.317 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.283 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.281 | a.22.1 | Histone-fold |
| View | Download | 0.263 | c.55.3 | Ribonuclease H-like |
| View | Download | 0.262 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.259 | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.259 | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.254 | c.47.1 | Thioredoxin-like |
| View | Download | 0.245 | c.55.3 | Ribonuclease H-like |
| View | Download | 0.243 | b.55.1 | PH domain-like |
| View | Download | 0.242 | a.130.1 | Chorismate mutase II |
| View | Download | 0.241 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.240 | a.29.2 | Bromodomain |
| View | Download | 0.239 | a.1.1 | Globin-like |
| View | Download | 0.235 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.232 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.230 | a.118.1 | ARM repeat |
| View | Download | 0.216 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.208 | d.227.1 | OsmC-like |
| View | Download | 0.200 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
|
Region A: Residues: [209-452] |
1 11 21 31 41 51
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1 SYQIVHKEKV LRDLQDCFVK GPRSHKTGQH TIISLNLDSK KNYYKVGVMT AIMCLASHPK 60
61 EVPEAIEVFH KVLTSFVSAK VFYTERVQFL FLRYLYINVA GLDGGDQSHC IFIHGLTIDT 120
121 AIHMGLNEDL RRLYLSKNHP IEEIPYLERL WLWILFTDVK ISLSTGIPVR INDDFVNKVR 180
181 LENYSSSGDI LLYKTTLRLR NIMKQIHARE KPPDIPLIIE DLKKFTIKMF KPLDFYLNAS 240
241 NLNG
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [453-518] |
1 11 21 31 41 51
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1 NEFTELQLWH ATLHMIGSLS NLYTLTHQDF DARIFNFSVL APLNSLHLCF NVLETYFELD 60
61 NSKLSS
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.685 | a.4.1 | Homeodomain-like |
| View | Download | 0.685 | a.4.1 | Homeodomain-like |
| View | Download | 0.665 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.665 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.661 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.661 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.658 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.658 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.645 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.645 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.640 | a.118.1 | ARM repeat |
| View | Download | 0.605 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.592 | a.4.1 | Homeodomain-like |
| View | Download | 0.563 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.560 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.553 | a.39.1 | EF-hand |
| View | Download | 0.550 | a.5.2 | UBA-like |
| View | Download | 0.545 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.533 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.523 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.523 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.518 | a.77.1 | DEATH domain |
| View | Download | 0.512 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.499 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.487 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.474 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.467 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.456 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.440 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.436 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.429 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.427 | a.4.1 | Homeodomain-like |
| View | Download | 0.420 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.411 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.407 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.399 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.394 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.386 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.384 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.379 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.377 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.375 | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.370 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.359 | a.2.3 | Chaperone J-domain |
| View | Download | 0.354 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.349 | a.112.1 | Description not found. |
| View | Download | 0.348 | d.58.17 | Metal-binding domain |
| View | Download | 0.347 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.336 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.336 | a.64.1 | Saposin |
| View | Download | 0.325 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.322 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.320 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.319 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.303 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.303 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.302 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.300 | a.112.1 | Description not found. |
| View | Download | 0.299 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.299 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.290 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.287 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.283 | c.47.1 | Thioredoxin-like |
| View | Download | 0.283 | a.20.1 | PGBD-like |
| View | Download | 0.282 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.281 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.281 | a.39.1 | EF-hand |
| View | Download | 0.279 | a.21.1 | HMG-box |
| View | Download | 0.278 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.277 | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.275 | a.39.1 | EF-hand |
| View | Download | 0.274 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.266 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.263 | a.64.1 | Saposin |
| View | Download | 0.263 | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.262 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.257 | a.46.1 | Methionine synthase domain |
| View | Download | 0.255 | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.245 | a.59.1 | PAH2 domain |
| View | Download | 0.245 | a.3.1 | Cytochrome c |
| View | Download | 0.238 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.238 | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.234 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.230 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.223 | d.102.1 | Regulatory factor Nef |
| View | Download | 0.222 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.216 | a.5.2 | UBA-like |
| View | Download | 0.212 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.210 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.209 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.209 | a.5.2 | UBA-like |
| View | Download | 0.203 | a.3.1 | Cytochrome c |
| View | Download | 0.202 | a.28.3 | Retrovirus capsid protein C-terminal domain |
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Region A: Residues: [519-705] |
1 11 21 31 41 51
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1 KSLCLSKKWP HLNNALFLIY VNAFRALIQI YTIFLQYMEN KDIQLFIQRN SSALTYSICP 60
61 GDFEGPHNKC ISLKIAFKEM ENIFDHIHQE KLKPLTQIWQ NSYYFSIIIS MEKIGRRAFN 120
121 KGMKNIDEGP ETENDATENS LTTILNDLEG PLEDFSENFI DDILGSPSAF FDTAISGWSN 180
181 FEDFFSR
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
