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View Structure Prediction Details

Protein: YLL053C
Organism: Saccharomyces cerevisiae
Length: 152 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL053C.

Description E-value Query
Range		 Subject
Range
TIP32_ARATH - Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1
 2.0E-39 [2..152] [115..266]
gi|18481673 - gi|18481673|gb|AAL73511.1|AF465730_1 aquaporin-4 [Coturnix coturnix]
 9.0E-39 [4..144] [133..276]
AQP4_DIPME - Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1
 9.0E-39 [4..145] [121..265]
gi|1808954 - gi|1808954|gb|AAB41570.1| mercurial-insensitive water channel 3 [Mus musculus]
 1.0E-38 [3..145] [151..296]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 1.0E-38 [4..137] [139..275]
AQP4_RAT - Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1
 2.0E-38 [4..145] [121..265]
gi|255646628 - gi|255646628|gb|ACU23788.1| unknown [Glycine max]
PIP27_MAIZE - Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1
 3.0E-38 [3..142] [132..282]

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Predicted Domain #1
Region A:
Residues: [1-152] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFPQIIAGM AAGGAASAMT PGKVLFTNAL GLGCSRSRGL FLEMFGTAVL CLTVLMTAVE  60
   61 KRETNFMAAL PIGISLFMAH MALTGYTGTG VNPARSLGAA VAARYFPHYH WIYWISPLLG 120
  121 AFLAWSVWQL LQILDYTTYV NAEKAAGQKK ED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 177.917458
Match: 1j4nA_
Description: Aquaporin-1
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle