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View Structure Prediction Details

Protein: YLR122C
Organism: Saccharomyces cerevisiae
Length: 125 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YLR122C.

Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLYQNCMF LYVYTDVCVR LCASIFYIML EAKFALRIPA LRPSYTWGQW RSFIQSSFYG  60
   61 RTFVAFSGPS MKNYITICFL LKSIEVSVDR TALHGTSAEA SASNFQRIQT KNLSKYNCNI 120
  121 PACCV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.802 a.4.5 "Winged helix" DNA-binding domain
View Download 0.674 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.674 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.671 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.645 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.642 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.636 a.26.1 4-helical cytokines
View Download 0.636 a.26.1 4-helical cytokines
View Download 0.628 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.619 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle