YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YLR415C
Organism: Saccharomyces cerevisiae
Length: 112 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for YLR415C.

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLSAQLMRT VTASHLTLRA LSTPPLFQHR QIAAVEWCGT TRPGLARQKR TQHASSVISK  60
   61 SGVLSAKPSS VFLALLAGKL AEKYIYARML LFHVSVVNEC PVVFHSGPVV WK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.519 a.24.9 alpha-catenin/vinculin
View Download 0.506 a.24.9 alpha-catenin/vinculin
View Download 0.499 a.79.1 Antitermination factor NusB
View Download 0.412 a.79.1 Antitermination factor NusB
View Download 0.412 a.79.1 Antitermination factor NusB
View Download 0.400 a.24.9 alpha-catenin/vinculin
View Download 0.374 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.339 a.2.5 Prefoldin
View Download 0.333 a.74.1 Cyclin-like
View Download 0.299 a.39.1 EF-hand


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle