YRC Public Data Repository - Protein Structure Prediction

Protein:	AIM32
Organism:	Saccharomyces cerevisiae
Length:	311 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM32.

Description	E-value	Query Range	Subject Range
AIM32_YEAS8 - Altered inheritance of mitochondria protein 32 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / P... AIM32_YEAS2 - Altered inheritance of mitochondria protein 32 OS=Saccharomyces cerevisiae (strain JAY291) GN=AIM32 ... AIM32 - Putative protein of unknown function; null mutant is viable and displays elevated frequency of mitoc... AIM32_YEAST - Altered inheritance of mitochondria protein 32 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28... AIM32_YEAS7 - Altered inheritance of mitochondria protein 32 OS=Saccharomyces cerevisiae (strain YJM789) GN=AIM32 ...	0.0	[1..311]	[1..311]
gi\|17230100, gi\|... - gi\|17230100\|ref\|NP_486648.1\| hypothetical protein all2608 [Nostoc sp. PCC 7120], gi\|17131701\|dbj\|BAB... gi\|25381569 - pir\|\|AI2131 hypothetical protein all2608 [imported] - Nostoc sp. (strain PCC 7120)	2.0E-66	[81..311]	[42..241]
gi\|15237439, gi\|... - gi\|20147291\|gb\|AAM10359.1\| AT5g40510/MNF13_30 [Arabidopsis thaliana], gi\|17979496\|gb\|AAL50084.1\| AT5...	4.0E-44	[140..310]	[93..238]
gi\|16329189, gi\|... - gi\|1651669\|dbj\|BAA16597.1\| sll1203 [Synechocystis sp. PCC 6803], gi\|16329189\|ref\|NP_439917.1\| hypoth... gi\|7470022 - pir\|\|S74445 hypothetical protein sll1203 - Synechocystis sp. (strain PCC 6803)	6.0E-44	[118..311]	[67..229]

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Predicted Domain #1

Region A:
Residues: [1-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRITVKTLQ QRASFHHSFK HISVPDLHTR AQNDQTNCYC QEINARLPSK TDPLDPHIKL  60
   61 PHRTPNYNKH VLLLSPGDRF AQPWKVAWNH NLDTNTNRPY NAISKLRSHL GGSPGILINA 120
  121 VHLQNEFIPR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [131-311]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKQHDEWLYF FVIPDMKLYV IKETDIEEFA SFLDEGAIQA PKLSFQDYLS GKAKASQQVH  60
   61 EVHHRKLTRF QGETFLRDWN LVCGHYKRDA KCGEMGPDII AAFQDEKLFP ENNLALISHI 120
  121 GGHIFAGNVI FYKLFGREKM QNKLDSLWFG KVYPHNLKLL CENLENGKII DEMYRGGISM 180
  181 N

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits