| Protein: | GCR2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 534 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCR2.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..1] | [534..1] |
|
|
216.0 | [0..11] | [157..1051] |
|
|
163.0 | [0..134] | [533..69] |
|
|
100.0 | [0..129] | [248..63] |
|
|
60.0 | [0..352] | [533..56] |
|
|
55.0 | [0..12] | [112..206] |
|
|
51.0 | [0..14] | [161..90] |
|
|
51.0 | [0..23] | [178..250] |
|
|
50.0 | [0..19] | [124..465] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MHHQTKLDVF IIRAYNLLSN ESVISGASLQ SVTNSPQTTT NTPSGMVNGA VGTGIANPTG 60
61 LMGSDSTPNI DEIITSTGSN ALTKTNSDSA NGTPNGNSSS TSAISNASNP ATTGNNASSS 120
121 ATSNGIYTQA QYSQLFAKIS KLYNATLSSG SIDDRST
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [158-237] |
1 11 21 31 41 51
| | | | | |
1 SPKSAIELYQ RFQQMIKELE LSFDASPYAK YFRRLDGRLW QIKTDSELEN DELWRLVSMS 60
61 IFTVFDPQTG QILTQGRRKG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.913 | a.64.1 | Saposin |
| View | Download | 0.874 | a.48.4 | Description not found. |
| View | Download | 0.858 | a.7.16 | Description not found. |
| View | Download | 0.857 | a.204.1 | Description not found. |
| View | Download | 0.814 | a.7.16 | Description not found. |
| View | Download | 0.794 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.759 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.737 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.726 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [238-318] |
1 11 21 31 41 51
| | | | | |
1 NSLNTSTKGS PSDLQGINNG NNNGNNGNIG NGSNIKNYGN KNMPNNRTKK RGTRVAKNAK 60
61 NGKNNKNSNK ERNGITDTSA F
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.418 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.364 | N/A | N/A | a.281.1 | Description not found. |
| View | Download | 0.291 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.283 | N/A | N/A | d.27.1 | Ribosomal protein S16 |
| View | Download | 0.271 | N/A | N/A | b.61.8 | Description not found. |
| View | Download | 0.271 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [319-534] |
1 11 21 31 41 51
| | | | | |
1 SNTTISNPGT NMLFDPSLSQ QLQKRLQTLS QDVNSRSLTG YYTQPTSPGS GGFEFGLSHA 60
61 DLNPNASSNT MGYNTMSNNG SHSWKRRSLG SLDVNTLDDE AVEELLQLTN TSKRQRPMTT 120
121 AAEGALINDG PDTNLNANNT QMKVDLNPSN SMGPIDTEAV IRPLKEAYDA IISEKGQRIV 180
181 QLERELELQR QETQWLRKML IEDMGCVRSM LRDLQR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
