Protein: | GCR2 |
Organism: | Saccharomyces cerevisiae |
Length: | 534 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCR2.
Description | E-value | Query Range |
Subject Range |
|
328.0 | [0..1] | [534..1] |
|
216.0 | [0..11] | [157..1051] |
|
163.0 | [0..134] | [533..69] |
|
100.0 | [0..129] | [248..63] |
|
60.0 | [0..352] | [533..56] |
|
55.0 | [0..12] | [112..206] |
|
51.0 | [0..14] | [161..90] |
|
51.0 | [0..23] | [178..250] |
|
50.0 | [0..19] | [124..465] |
Region A: Residues: [1-157] |
1 11 21 31 41 51 | | | | | | 1 MHHQTKLDVF IIRAYNLLSN ESVISGASLQ SVTNSPQTTT NTPSGMVNGA VGTGIANPTG 60 61 LMGSDSTPNI DEIITSTGSN ALTKTNSDSA NGTPNGNSSS TSAISNASNP ATTGNNASSS 120 121 ATSNGIYTQA QYSQLFAKIS KLYNATLSSG SIDDRST |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [158-237] |
1 11 21 31 41 51 | | | | | | 1 SPKSAIELYQ RFQQMIKELE LSFDASPYAK YFRRLDGRLW QIKTDSELEN DELWRLVSMS 60 61 IFTVFDPQTG QILTQGRRKG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.913 | a.64.1 | Saposin |
View | Download | 0.874 | a.48.4 | Description not found. |
View | Download | 0.858 | a.7.16 | Description not found. |
View | Download | 0.857 | a.204.1 | Description not found. |
View | Download | 0.814 | a.7.16 | Description not found. |
View | Download | 0.794 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.759 | a.7.6 | Ribosomal protein S20 |
View | Download | 0.737 | a.71.2 | Helical domain of Sec23/24 |
View | Download | 0.726 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
Region A: Residues: [238-318] |
1 11 21 31 41 51 | | | | | | 1 NSLNTSTKGS PSDLQGINNG NNNGNNGNIG NGSNIKNYGN KNMPNNRTKK RGTRVAKNAK 60 61 NGKNNKNSNK ERNGITDTSA F |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.418 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.364 | N/A | N/A | a.281.1 | Description not found. |
View | Download | 0.291 | N/A | N/A | a.28.1 | ACP-like |
View | Download | 0.283 | N/A | N/A | d.27.1 | Ribosomal protein S16 |
View | Download | 0.271 | N/A | N/A | b.61.8 | Description not found. |
View | Download | 0.271 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
Region A: Residues: [319-534] |
1 11 21 31 41 51 | | | | | | 1 SNTTISNPGT NMLFDPSLSQ QLQKRLQTLS QDVNSRSLTG YYTQPTSPGS GGFEFGLSHA 60 61 DLNPNASSNT MGYNTMSNNG SHSWKRRSLG SLDVNTLDDE AVEELLQLTN TSKRQRPMTT 120 121 AAEGALINDG PDTNLNANNT QMKVDLNPSN SMGPIDTEAV IRPLKEAYDA IISEKGQRIV 180 181 QLERELELQR QETQWLRKML IEDMGCVRSM LRDLQR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.