| Protein: | SPS18 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 300 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPS18.
| Description | E-value | Query Range |
Subject Range |
|
|
282.0 | [0..9] | [297..3] |
|
|
282.0 | [0..9] | [297..3] |
|
|
275.0 | [0..7] | [290..5] |
|
|
273.0 | [0..9] | [295..3] |
|
|
271.0 | [0..9] | [295..3] |
|
|
269.0 | [0..9] | [297..3] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MRLFENSKDM ENRKRLLRAK KAAGNNNCFE CKSVNPQFVS CSFGIFICVN CANLLRGMGT 60
61 NIFCVKSITM DNFEEKDVRR VEKSGNNRFG SFLSKNGILQ NGIPLREKYD NLFAKSYKRR 120
121 LANEVRSNDI NRNMYLGFNN FQQYTNGATS QIRDRTLREI SNNS
|
| Detection Method: |  |
| Confidence: | 90.529817 |
| Match: | 1dcqA |
| Description: | Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [165-229] |
1 11 21 31 41 51
| | | | | |
1 NASEGAEFVL PEKVLGSDNF QDCERFPACL SSERNLDENN VTSATSTLTI EKFQNDPIGT 60
61 ISRSW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.766 | a.4.1 | Homeodomain-like |
| View | Download | 0.728 | a.4.1 | Homeodomain-like |
| View | Download | 0.728 | a.4.1 | Homeodomain-like |
| View | Download | 0.716 | a.4.1 | Homeodomain-like |
| View | Download | 0.670 | a.4.1 | Homeodomain-like |
| View | Download | 0.626 | a.4.1 | Homeodomain-like |
| View | Download | 0.598 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.598 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.568 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.568 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [230-300] |
1 11 21 31 41 51
| | | | | |
1 QLLSDALYKS YEDFKGSVVQ PTIENIQQRN LPNDIKRSFV HFNEKLHETP HLPSPVFSCF 60
61 TGGDILPPEF N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.788 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.788 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.690 | N/A | N/A | a.48.4 | Description not found. |
| View | Download | 0.671 | N/A | N/A | a.272.1 | Description not found. |
| View | Download | 0.628 | N/A | N/A | a.29.14 | Description not found. |
| View | Download | 0.628 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.602 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.587 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
