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View Structure Prediction Details

Protein: SPS4
Organism: Saccharomyces cerevisiae
Length: 338 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPS4.

Description E-value Query
Range
Subject
Range
gi|172674 - gi|172674|gb|AAA35081.1| sporulation-specific protein [Saccharomyces cerevisiae]
0.0 [1..338] [1..338]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSNLNIVKV TKPQEENKNF LHKNTNEPNE MEQSQTQEAV TENFTENSNL SANEHAARRG  60
   61 RLNLKTVDHI ETYPIVQETE EIAKKIALTR IILAQTKPRI DKVVVSRPVQ AVAPVVNFFD 120
  121 KMANSTLSTV ERVVPSLKTK TYKRLGEEIA LPYTLSKKYG KQLRDTTARN GDNYVYQPVH 180
  181 GRLMKFRKYY NEKFIDTKGK PLIRGQLDPV LLPVNNTFEK VTVKYLPKGK KVPNDSFSCE 240
  241 FNRGLALEYN FMTRAVSAVS HQVVGIAKLP IAYGYHTNSV YNKNLDKQAD LKMKNVLRGT 300
  301 WDTITDLERE IWASVTDRSL FRFFGNKSEG GDLPHLVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle