| Protein: | SVL3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 825 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SVL3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..817] | [1..817] |
|
|
0.0 | [261..761] | [53..538] |
|
|
9.0E-67 | [230..761] | [12..535] |
|
|
5.0E-62 | [6..342] | [1..321] |
|
|
1.0E-61 | [6..339] | [1..319] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MSSSSLRVLA IGNNPNILFY TSRFQLAKNI DLYHVNDSKS CQFEIETEYY GKDRFELENH 60
61 FTSIEHLTEA LSSKSSEAVF DIIIMSAPSL QELSSLASKL TSIIDSNTKI FLESSGFIQL 120
121 EPFVKLSMES PHVNVFSILT DLDIRQIGPN HFKHFPSTAK ENTIYLGESK SSTEKYSSGV 180
181 ITLLTTFEKL FAKLFSNIKI NLCNFSSIEF LSQ
|
| Detection Method: |  |
| Confidence: | 53.221849 |
| Match: | 1ks9A_ |
| Description: | Ketopantoate reductase PanE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [214-345] |
1 11 21 31 41 51
| | | | | |
1 QWKLAISRIC FDPLLIMFEQ ENPSDLDQQI IAKPLISGLV TEIITVAKTM GARLNSSHDN 60
61 ENSLLSLWKN SYHSTNKPPA LVYHFIHQTT PLNIDILLLQ TILLADDFGI KTPYLEFLYS 120
121 VLSQFERLNS GK
|
| Detection Method: | |
| Confidence: | 53.221849 |
| Match: | 1ks9A_ |
| Description: | Ketopantoate reductase PanE |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [346-550] |
1 11 21 31 41 51
| | | | | |
1 SKWFIRSDEK TQILQSLQKS QKNESALQTQ ITSLQGQISK LRQELLMQAK QHEMETNELK 60
61 EKHQVALKAQ AQAQAQAQSQ AQTSIEALTP TEATNQSDTN EYKATGTPNL RDIEDMALYS 120
121 VNYGDSPVRS PPPVVSSQPQ MNSPLSSHSQ TFGENNGTND KLLQERELQL RKKELELQER 180
181 ELEFQKRALQ QQRFNNSNNS IPRKP
|
| Detection Method: | |
| Confidence: | 28.221849 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [551-825] |
1 11 21 31 41 51
| | | | | |
1 SFPQLQQSAN VRSNSRGMHG TNGAMSQPAS AGNFVDPISS SIAAYDPQQP PSLPLQQPQQ 60
61 SVQVQPFHSH SIKPTSRKNR NSNMPNIGNP SSINMSDFGR PPNNSSQTRL NSMPTHSIVN 120
121 QNRLRSQQSK NKLNMPHATN PNNTFNQVPA PSLNNHVPTQ RQFSSSTMIE VTNNNNKVNN 180
181 SSSNPDISTN SVVHNAMQFT NTNNNTSSTV DINDPKNIAP PPTTSVSAPS TPTLSSSSQM 240
241 ANMASPSTDN GDNEEKNGGK KKRFGLFKKK NKSKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
