YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YCL002C
Organism: Saccharomyces cerevisiae
Length: 251 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCL002C.

Description E-value Query
Range
Subject
Range
YCL002C - Putative protein of unknown function; YCL002C is not an essential gene
217.0 [0..100] [251..1]

Back

Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVIVLQGLA GFLSIIAILC QKRYNKLHRS IYGLSYDLFL LDFVGNGLYL YCALHYCYSS  60
   61 LVREQLSQRF PLFYPLNDAR SIPISSFLIL KDFCVSCCCM MVLRQLYYYR STKHIYQGIS 120
  121 ITSIIIISVF LVLGIFTYGC SISNLPLKNS GKFGVFYLEH INYLWVMANL LKCFKYVPQM 180
  181 SINWMGCSTV GLSSKFALIS FLAESIDLLG RLVIPTNALF YEIPFNSTPF WVKLIQFVTY 240
  241 WSYFVKFSMF T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle