YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YHR213W-B
Organism: Saccharomyces cerevisiae
Length: 99 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR213W-B.

Description E-value Query
Range
Subject
Range
YAN4_YEAST - Uncharacterized protein YAR064W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAR064W ...
YAR064W - Putative protein of unknown function
196.0 [0..1] [99..1]

Back

Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIDFCCSYI AGTHGRERAP SFTGTFVSHV SAENNCRPRR SEITQPCASG TEKKHFAATE  60
   61 KQCTNSLEGS RKDFLSLPLG HSYLFLFCFW RMICSEPKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.399 a.29.10 Description not found.
View Download 0.391 d.56.1 GroEL-intermediate domain like
View Download 0.366 d.6.1 Prion-like
View Download 0.357 a.7.6 Ribosomal protein S20
View Download 0.337 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle