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View Structure Prediction Details

Protein: gi|2498728, gi|2...
Organism: Saccharomyces cerevisiae
Length: 86 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2498728, gi|2....

Description E-value Query
Range
Subject
Range
OST5 - Zeta subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-li...
OST5_YEAST - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST5 OS=Saccharomyces cerevis...
116.0 [0..1] [86..1]
gi|44984769, gi|... - gi|45198759|ref|NP_985788.1| AFR241Wp [Ashbya gossypii ATCC 10895], gi|44984769|gb|AAS53612.1| AFR24...
gi|44984769 - gi|44984769|gb|AAS53612.1| AFR241Wp [Ashbya gossypii ATCC 10895]
114.0 [0..5] [86..24]
gi|49640185, gi|... - gi|50302241|ref|XP_451054.1| unnamed protein product [Kluyveromyces lactis], gi|49640185|emb|CAH0264...
85.0 [0..12] [86..4]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYEQLYKEF HSSKSFQPFI HLDTQPKFAI CGLIVTLAVL SSALFTVGSK SSYIKKLFFY  60
   61 TILSVIGSLF AGLTTVFASN SFGVYV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.810 a.47.2 t-snare proteins
View Download 0.810 a.47.2 t-snare proteins
View Download 0.771 f.17.1 F1F0 ATP synthase subunit C
View Download 0.763 a.7.14 Description not found.
View Download 0.762 a.7.11 Description not found.
View Download 0.728 f.17.1 F1F0 ATP synthase subunit C
View Download 0.701 a.7.14 Description not found.
View Download 0.692 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.688 a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.605 a.24.17 Group V grass pollen allergen


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle