YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|1730784, gi\|8...
Organism:	Saccharomyces cerevisiae
Length:	100 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1730784, gi|8....

Description	E-value	Query Range	Subject Range
gi\|190409131 - gi\|190409131\|gb\|EDV12396.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] YNO6_YEAST - Uncharacterized protein YNL146W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL146W ... YNL146W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...	87.0	[0..1]	[100..1]

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Predicted Domain #1

Region A:
Residues: [1-100]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTKHTTSH HMELIRIIIL RLLFILIMLI FRNSVSFKMT FQELLPRFYK KNSNSVSNNN  60
   61 RPSSIFSENL VDFDDVNMVD KTRLFIFLFF SFIITIPFMV

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Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits