| Protein: | GPC4 |
| Organism: | Homo sapiens |
| Length: | 556 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPC4.
| Description | E-value | Query Range |
Subject Range |
|
|
842.0 | [0..1] | [556..1] |
|
|
831.0 | [0..1] | [556..1] |
|
|
825.0 | [0..1] | [556..1] |
|
|
816.0 | [0..21] | [556..21] |
|
|
811.0 | [0..20] | [556..20] |
|
|
805.0 | [0..24] | [556..24] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MARFGLPALL CTLAVLSAAL LAAELKSKSC SEVRRLYVSK GFNKNDAPLH EINGDHLKIC 60
61 PQGSTCCSQE MEEKYSLQSK DDFKSVVSEQ CNHLQAVFAS RYKKFD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.600 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.501 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.497 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.484 | N/A | N/A | a.29.2 | Bromodomain |
|
Region A: Residues: [107-237] |
1 11 21 31 41 51
| | | | | |
1 EFFKELLENA EKSLNDMFVK TYGHLYMQNS ELFKDLFVEL KRYYVVGNVN LEEMLNDFWA 60
61 RLLERMFRLV NSQYHFTDEY LECVSKYTEQ LKPFGDVPRK LKLQVTRAFV AARTFAQGLA 120
121 VAGDVVSKVS V
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.977 | N/A | N/A | a.118.22 | Description not found. |
| View | Download | 0.976 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.958 | N/A | N/A | a.29.16 | Description not found. |
| View | Download | 0.951 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.931 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.920 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.918 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.864 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.848 | N/A | N/A | a.160.1 | Poly(A) polymerase, middle domain |
|
Region A: Residues: [238-306] |
1 11 21 31 41 51
| | | | | |
1 VNPTAQCTHA LLKMIYCSHC RGLVTVKPCY NYCSNIMRGC LANQGDLDFE WNNFIDAMLM 60
61 VAERLEGPF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.841 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.833 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.785 | N/A | N/A | a.8.11 | Description not found. |
| View | Download | 0.776 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.759 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.715 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.699 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.586 | N/A | N/A | a.60.2 | RuvA domain 2-like |
|
Region A: Residues: [307-431] |
1 11 21 31 41 51
| | | | | |
1 NIESVMDPID VKISDAIMNM QDNSVQVSQK VFQGCGPPKP LPAGRISRSI SESAFSARFR 60
61 PHHPEERPTT AAGTSLDRLV TDVKEKLKQA KKFWSSLPSN VCNDERMAAG NGNEDDCWNG 120
121 KGKSR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.454 | N/A | N/A | a.29.12 | Description not found. |
| View | Download | 0.358 | N/A | N/A | d.33.1 | Bacterial protein-export protein SecB |
| View | Download | 0.348 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.333 | N/A | N/A | d.33.1 | Bacterial protein-export protein SecB |
| View | Download | 0.301 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.298 | N/A | N/A | c.23.14 | Nucleoside 2-deoxyribosyltransferase |
| View | Download | 0.287 | N/A | N/A | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.284 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.239 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.220 | N/A | N/A | a.7.1 | Spectrin repeat |
|
Region A: Residues: [432-466] |
1 11 21 31 41 51
| | | | | |
1 YLFAVTGNGL ANQGNNPEVQ VDTSKPDILI LRQIM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [467-556] |
1 11 21 31 41 51
| | | | | |
1 ALRVMTSKMK NAYNGNDVDF FDISDESSGE GSGSGCEYQQ CPSEFDYNAT DHAGKSANEK 60
61 ADSAGVRPGA QAYLLTVFCI LFLVMQREWR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.495 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.466 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.454 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.350 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.337 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.328 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.325 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.220 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.211 | N/A | N/A | a.130.1 | Chorismate mutase II |
