| Protein: | gi|1335029, gi|1... |
| Organism: | Homo sapiens |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1335029, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-90 | [1..347] | [86..423] |
|
|
1.0E-89 | [9..347] | [448..777] |
|
|
9.0E-88 | [8..347] | [7..337] |
|
|
5.0E-86 | [8..347] | [131..461] |
|
Region A: Residues: [1-34] |
1 11 21 31 41 51
| | | | | |
1 TSTHSYFCSI YSSDEDDEDF EMCDHDYDGL LPKS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [35-273] |
1 11 21 31 41 51
| | | | | |
1 GKRHLGKTRW TREEDEKLKK LVEQNGTDDW KVIANYLPNR TDVQCQHRWQ KVLNPELIKG 60
61 PWTKEEDQRV IELVQKYGPK RWSVIAKHLK GRIGKQCRER WHNHLNPEVK KTSWTEEEDR 120
121 IIYQAHKRLG NRWAEIAKLL PGRTDNAIKN HWNSTMRRKV EQEGYLQESS KASQPAVATS 180
181 FQKNSHLMGF AQAPPTAQLP ATGQPTVNND YSYYHISEAQ NVSSHVPYPV ALHVNIVNV
|
| Detection Method: | |
| Confidence: | 45.30103 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [274-348] |
1 11 21 31 41 51
| | | | | |
1 PQPAAAAIQR HYNDEDPEKE KRIKELELLL MSTENELKGQ QLCGPLLNSD IFSDWAANWD 60
61 GSLCFATYIV NQQRQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
