| Protein: | gi|1279761, gi|7... |
| Organism: | Homo sapiens |
| Length: | 341 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1279761, gi|7....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..341] | [142..477] |
|
|
0.0 | [1..341] | [1..341] |
|
|
0.0 | [1..341] | [1..341] |
|
|
0.0 | [1..341] | [1..373] |
|
|
0.0 | [1..341] | [1..366] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MAQESPKNSA AEIPVTSNGE VDDSREHSFN RDLKHSLPSG LGLSETQITS HGFDNTKEGV 60
61 IEAGAFQGGQ RTQTKSGPVI LADEIKNPAM EKLELVRKWS LNT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.206 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
|
Region A: Residues: [104-341] |
1 11 21 31 41 51
| | | | | |
1 YKCTRQIISE KLGRGSRTVD LELEAQIDIL RDNKKKYENI LKLAQTLSTQ LFQMVHTQRQ 60
61 LGDAFADLSL KSLELHEEFG YNADTQKLLA KNGETLLGAI NFFIASVNTL VNKTIEDTLM 120
121 TVKQYESARI EYDAYRTDLE ELNLGPRDAN TLPKIEQSQH LFQAHKEKYD KMRNDVSVKL 180
181 KFLEENKVKV LHNQLVLFHN AIAAYFAGNQ KQLEQTLKQF HIKLKTPGVD APSWLEEQ
|
| Detection Method: | |
| Confidence: | 85.0 |
| Match: | 1i49A |
| Description: | Arfaptin, Rac-binding fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.124619761789 | bayes_pls_golite062009 |
| binding | 2.43584893484993 | bayes_pls_golite062009 |
| protein binding | 1.87308005875135 | bayes_pls_golite062009 |
| signal transducer activity | 1.15315260510573 | bayes_pls_golite062009 |
| molecular transducer activity | 1.15315260510573 | bayes_pls_golite062009 |
| GTPase binding | 0.50066793947946 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.459881864914566 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.456472132383968 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.180886944097381 | bayes_pls_golite062009 |
| small GTPase binding | 0.0531578648468707 | bayes_pls_golite062009 |
