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View Structure Prediction Details

Protein: SCG5
Organism: Homo sapiens
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCG5.

Description E-value Query
Range
Subject
Range
gi|109080479 - gi|109080479|ref|XP_001083853.1| PREDICTED: secretogranin V (7B2 protein) isoform 3 [Macaca mulatta]
0.0 [1..212] [1..212]
gi|67970826 - gi|67970826|dbj|BAE01755.1| unnamed protein product [Macaca fascicularis]
0.0 [1..212] [1..212]
gi|13529158 - gi|13529158|gb|AAH05349.1| Secretogranin V (7B2 protein) [Homo sapiens]
0.0 [1..212] [1..212]
gi|60826870 - gi|60826870|gb|AAX36775.1| secretory granule neuroendocrine protein 1 [synthetic construct]
0.0 [1..212] [1..211]
gi|88682959, gi|... - gi|88682959|gb|AAI05454.1| Secretogranin V (7B2 protein) [Bos taurus], gi|114051029|ref|NP_001039463...
0.0 [1..212] [1..211]
gi|26327675 - gi|26327675|dbj|BAC27581.1| unnamed protein product [Mus musculus]
0.0 [1..212] [1..212]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRMVSTML SGLLFWLASG WTPAFAYSPR TPDRVSEADI QRLLHGVMEQ LGIARPRVEY  60
   61 PAHQAMNLVG PQSIEGGAHE GLQHLGPFGN IPNIVAELTG DNIPKDFSED QGYPDPPNPC 120
  121 PVGKTADDGC LENTPDTAEF SREFQLHQHL FDPEHDYPGL GKWNKKLLYE KMKGGERRKR 180
  181 RSVNPYLQGQ RLDNVVAKKS VPHFSDEDKD PE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle