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View Structure Prediction Details

Protein: MEMO1
Organism: Homo sapiens
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MEMO1.

Description E-value Query
Range
Subject
Range
MEMO1_MOUSE - Protein MEMO1 OS=Mus musculus GN=Memo1 PE=1 SV=1
445.0 [0..1] [297..1]
MEMO1_RAT - Protein MEMO1 OS=Rattus norvegicus GN=Memo1 PE=1 SV=1
445.0 [0..1] [297..1]
gi|50740689 - gi|50740689|ref|XP_419531.1| PREDICTED: similar to CGI-27 protein [Gallus gallus]
443.0 [0..1] [297..1]
MEMO1_XENLA - Protein MEMO1 OS=Xenopus laevis GN=memo1 PE=2 SV=1
443.0 [0..1] [297..1]
gi|47123293 - gi|47123293|gb|AAH70046.1| MEMO1 protein [Homo sapiens]
443.0 [0..1] [297..1]
MEMO1_XENTR - Protein MEMO1 OS=Xenopus tropicalis GN=memo1 PE=2 SV=1
442.0 [0..1] [297..1]
MEMO1_DANRE - Protein MEMO1 OS=Danio rerio GN=memo1 PE=2 SV=1
438.0 [0..1] [297..1]
gi|82802793 - gi|82802793|gb|ABB92446.1| rcC2orf4 [Gorilla gorilla]
429.0 [0..1] [297..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRVVCREA SHAGSWYTAS GPQLNAQLEG WLSQVQSTKR PARAIIAPHA GYTYCGSCAA  60
   61 HAYKQVDPSI TRRIFILGPS HHVPLSRCAL SSVDIYRTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.925 N/A N/A d.68.3 SirA-like
View Download 0.925 N/A N/A d.68.3 SirA-like
View Download 0.872 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.866 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.839 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.819 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.743 N/A N/A d.68.3 SirA-like
View Download 0.739 N/A N/A d.68.3 SirA-like
View Download 0.656 N/A N/A c.13.2 Anti-sigma factor antagonist SpoIIaa

Predicted Domain #2
Region A:
Residues: [100-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYDLRIDQKI YGELWKTGMF ERMSLQTDED EHSIEMHLPY TAKAMESHKD EFTIIPVLVG  60
   61 ALSESKEQEF GKLFSKYLAD PSNLFVVSSD FCHWGQRFRY SYYDESQGEI YRSIEHLDKM 120
  121 GMSIIEQLDP VSFSNYLKKY HNTICGRHPI GVLLNAITEL QKNGMNMSFS FLNYAQSSQC 180
  181 RNWQDSSVSY AAGALTVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 2pw6A
Description: No description for 2pw6A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle