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View Structure Prediction Details

Protein: UTP11L
Organism: Homo sapiens
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP11L.

Description E-value Query
Range
Subject
Range
gi|197101757 - gi|197101757|ref|NP_001126408.1| UTP11-like, U3 small nucleolar ribonucleoprotein [Pongo abelii]
gi|55731348 - gi|55731348|emb|CAH92388.1| hypothetical protein [Pongo abelii]
1.0E-69 [1..253] [1..253]
UTP11_RAT - Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Utp11l PE=2 SV=1
5.0E-69 [1..253] [1..253]
gi|55586846 - gi|55586846|ref|XP_513332.1| PREDICTED: UTP11-like, U3 small nucleolar ribonucleoprotein, [Pan trogl...
6.0E-69 [1..253] [1..253]
UTP11_MOUSE - Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11l PE=2 SV=1
9.0E-69 [1..253] [1..253]
gi|4929657, gi|7... - gi|7705809|ref|NP_057121.1| UTP11-like, U3 small nucleolar ribonucleoprotein [Homo sapiens], gi|4929...
1.0E-68 [1..253] [1..253]
gi|76614468 - gi|76614468|ref|XP_617852.2| PREDICTED: similar to UTP11-like, U3 small nucleolar ribonucleoprotein,...
1.0E-66 [1..253] [1..253]
gi|57096574 - gi|57096574|ref|XP_532552.1| PREDICTED: similar to Probable U3 small nucleolar RNA-associated protei...
2.0E-64 [1..253] [1..253]
gi|31209297, gi|... - gi|31209297|ref|XP_313615.1| ENSANGP00000013368 [Anopheles gambiae str. PEST], gi|30176757|gb|EAA091...
AGAP004336-PA - UTP11-like, U3 small nucleolar ribonucleoprotein|protein_coding|2R:54821708:54822466:1|gene:AGAP0043...
1.0E-62 [3..253] [2..252]
gi|50759728 - gi|50759728|ref|XP_417753.1| PREDICTED: hypothetical protein [Gallus gallus]
4.0E-61 [1..253] [1..253]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAFRKAAK SRQREHRERS QPGFRKHLGL LEKKKDYKLR ADDYRKKQEY LKALRKKALE  60
   61 KNPDEFYYKM TRVKLQDGVH IIKETKEEVT PEQLKLMRTQ DVKYIEMKRV AEAKKIERLK 120
  121 SELHLLDFQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.654 0.354 nerve growth factor receptor signaling pathway a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.436 0.087 nerve growth factor receptor signaling pathway a.22.1 Histone-fold
View Download 0.460 0.005 nerve growth factor receptor signaling pathway f.18.1 F1F0 ATP synthase subunit A
View Download 0.401 0.004 nerve growth factor receptor signaling pathway f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.535 N/A N/A d.44.1 Fe,Mn superoxide dismutase (SOD), C-terminal domain

Predicted Domain #2
Region A:
Residues: [130-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKQQNKHVFF FDTKKEVEQF DVATHLQTAP ELVDRVFNRP RIETLQKEKV KGVTNQTGLK  60
   61 RIAKERQKQY NCLTQRIERE KKLFVIAQKI QTRKDLMDKT QKVKVKKETV NSPAIYKFQS 120
  121 RRKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.359 0.065 nerve growth factor receptor signaling pathway a.7.1 Spectrin repeat
View Download 0.394 0.030 nerve growth factor receptor signaling pathway f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.552 0.028 nerve growth factor receptor signaling pathway a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.327 0.025 nerve growth factor receptor signaling pathway a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.356 N/A N/A a.7.1 Spectrin repeat


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle