| Protein: | gi|12188746, gi|... |
| Organism: | Homo sapiens |
| Length: | 997 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12188746, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..997] | [73..1069] |
|
|
0.0 | [1..997] | [5..1001] |
|
|
0.0 | [1..997] | [74..1065] |
|
|
0.0 | [1..997] | [73..1065] |
|
|
0.0 | [1..997] | [73..1069] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MDDQPGEKEL VKRSQLDGEG DGPLSNQLSA SSTINPVPLV GLQKPEMSLP VKPGQGDSEA 60
61 SSPFTPVADE DSVVFSKLTY LGCASVNAPR SEVEALRMMS ILRSQCQISL DVTLSVPNVS 120
121 EGIVRLLDPQ TNTEIANYPI YKILFCVRGH DGTPESDCFA FTESHYNAEL FRIHVFRCEI 180
181 QEAVSRILYS FATAFRRSAK QTPLSATAAP QTPDSDIFTF SVSLEIKE
|
| Detection Method: |  |
| Confidence: | 3.31 |
| Match: | 2nmbA |
| Description: | Numb |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.96397612302369 | bayes_pls_golite062009 |
| protein binding | 1.85780451223644 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.3298316573981 | bayes_pls_golite062009 |
| actin binding | 0.863119832306992 | bayes_pls_golite062009 |
| transporter activity | 0.368466142481218 | bayes_pls_golite062009 |
| protein complex binding | 0.317346496371944 | bayes_pls_golite062009 |
| transcription regulator activity | 0.1902355170931 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0254091045498963 | bayes_pls_golite062009 |
| DNA binding | 0.0185420422808378 | bayes_pls_golite062009 |
|
Region A: Residues: [229-408] |
1 11 21 31 41 51
| | | | | |
1 DDGKGYFSAV PKDKDRQCFK LRQGIDKKIV IYVQQTTNKE LAIERCFGLL LSPGKDVRNS 60
61 DMHLLDLESM GKSSDGKSYV ITGSWNPKSP HFQVVNEETP KDKVLFMTTA VDLVITEVQE 120
121 PVRFLLETKV RVCSPNERLF WPFSKRSTTE NFFLKLKQIK QRERKNNTDT LYEVVCLESE 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [409-540] |
1 11 21 31 41 51
| | | | | |
1 SERERRKTTA SPSVRLPQSG SQSSVIPSPP EDDEEEDNDE PLLSGSGDVS KECAEKILET 60
61 WGELLSKWHL NLNVRPKQLS SLVRNGVPEA LRGEVWQLLA GCHNNDHLVE KYRILITKES 120
121 PQDSAITRDI NR
|
| Detection Method: | |
| Confidence: | 29.30103 |
| Match: | 2qq8A |
| Description: | No description for 2qq8A was found. |
|
Region A: Residues: [541-997] |
1 11 21 31 41 51
| | | | | |
1 TFPAHDYFKD TGGDGQDSLY KICKAYSVYD EEIGYCQGQS FLAAVLLLHM PEEQAFSVLV 60
61 KIMFDYGLRE LFKQNFEDLH CKFYQLERLM QEYIPDLYNH FLDISLEAHM YASQWFLTLF 120
121 TAKFPLYMVF HIIDLLLCEG ISVIFNVALG LLKTSKDDLL LTDFEGALKF FRVQLPKRYR 180
181 SEENAKKLME LACNMKISQK KLKKYEKEYH TMREQQAQQE DPIERFEREN RRLQEANMRL 240
241 EQENDDLAHE LVTSKIALRK DLDNAEEKAD ALNKELLMTK QKLIDAEEEK RRLEEESAQL 300
301 KEMCRRELDK AESEIKKNSS IIGDYKQICS QLSERLEKQQ TANKVEIEKI RQKVDDCERC 360
361 REFFNKEGRV KGISSTKEVL DEDTDEEKET LKNQLREMEL ELAQTKLQLV EAECKIQDLE 420
421 HHLGLALNEV QAAKKTWFNR TLSSIKTATG VQGKETC
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
