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View Structure Prediction Details

Protein: ATE1
Organism: Homo sapiens
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATE1.

Description E-value Query
Range
Subject
Range
gi|55962369, gi|... - gi|55962465|emb|CAI14814.1| arginyltransferase 1 [Homo sapiens], gi|55962369|emb|CAI12919.1| arginyl...
0.0 [5..518] [1..514]
gi|109090775 - gi|109090775|ref|XP_001101531.1| PREDICTED: arginyltransferase 1 isoform 1 [Macaca mulatta]
0.0 [1..518] [1..518]
gi|114633211 - gi|114633211|ref|XP_508079.2| PREDICTED: arginyltransferase 1 [Pan troglodytes]
0.0 [3..518] [64..579]
ATE1_MACFA - Arginyl-tRNA--protein transferase 1 OS=Macaca fascicularis GN=ATE1 PE=2 SV=1
0.0 [1..518] [1..518]
gi|73998733 - gi|73998733|ref|XP_544049.2| PREDICTED: similar to Arginyl-tRNA--protein transferase 1 (R-transferas...
0.0 [1..518] [1..522]
gi|55728544 - gi|55728544|emb|CAH91014.1| hypothetical protein [Pongo abelii]
gi|197099110 - gi|197099110|ref|NP_001125585.1| arginyltransferase 1 [Pongo abelii]
0.0 [10..518] [3..511]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFWAGGSPS VVDYFPSEDF YRCGYCKNES GSRSNGMWAH SMTVQDYQDL IDRGWRRSGK  60
   61 YVYKPVMNQT CCPQYTIRCR PLQFQPSKSH KKVLKKMLKF LAKGEVPKGS CEDEPMDSTM 120
  121 DDAVAGDFAL INKLDIQCDL KTLSDDIKES LESE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.585027
Match: PF04376.4
Description: No description for PF04376.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [155-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKNSKKEEPQ ELLQSQDFVG EKLGSGEPSH SVKVHTVPKP GKGADLSKPP CRKAKEIRKE  60
   61 RKRLKLMQQN PAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [228-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELEGFQAQGH PPSLFPPKAK SNQPKSLEDL IFESLPENAS HKLEVRVVRS SPPSSQFKAT  60
   61 LLESYQVYKR YQMVIHKNPP DTPTESQFTR FLCSSPLEAE TPPNGPDCGY GSFHQQYWLD 120
  121 GKIIAVGVID ILPNCVSSVY LYYDPDYSFL SLGVYSALRE IAFTRQLHEK TSQLSYYYMG 180
  181 FYIHSCPKMK YKGQYRPSDL LCPETYV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 100.229148
Match: PF04377.6
Description: No description for PF04377.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [435-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WVPIEQCLPS LENSKYCRFN QDPEAVDEDR STEPDRLQVF HKRAIMPYGV YKKQQKDPSE  60
   61 EAAVLQYASL VGQKCSERML LFRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.467 0.863 ubiquitin cycle a.5.2 UBA-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle