| Protein: | PAK1 |
| Organism: | Homo sapiens |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAK1.
| Description | E-value | Query Range |
Subject Range |
|
|
496.0 | [0..1] | [545..1] |
|
|
494.0 | [0..1] | [545..1] |
|
|
492.0 | [0..1] | [545..1] |
|
|
489.0 | [0..1] | [545..1] |
|
|
489.0 | [0..1] | [545..1] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MSNNGLDIQD KPPAPPMRNT STMIGVGSKD AGTLNHGSKP LPPNPEEKKK KDRFYRSILP 60
61 GDKTNKKKEK ERPEISLPSD FEHTIHVGFD AVTGEFTGMP EQWARLLQTS NITKSEQKKN 120
121 PQAVLDVLEF YNSKKTSNSQ KYMSFTDKSA EDYNSSNALN VKAVSETPA
|
| Detection Method: |  |
| Confidence: | 13.69897 |
| Match: | 1f3mA |
| Description: | pak1 autoregulatory domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [170-247] |
1 11 21 31 41 51
| | | | | |
1 VPPVSEDEDD DDDDATPPPV IAPRPEHTKS VYTRSVIEPL PVTPTRDVAT SPISPTENNT 60
61 TPPDALTRNT EKQKKKPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [248-545] |
1 11 21 31 41 51
| | | | | |
1 MSDEEILEKL RSIVSVGDPK KKYTRFEKIG QGASGTVYTA MDVATGQEVA IKQMNLQQQP 60
61 KKELIINEIL VMRENKNPNI VNYLDSYLVG DELWVVMEYL AGGSLTDVVT ETCMDEGQIA 120
121 AVCRECLQAL EFLHSNQVIH RDIKSDNILL GMDGSVKLTD FGFCAQITPE QSKRSTMVGT 180
181 PYWMAPEVVT RKAYGPKVDI WSLGIMAIEM IEGEPPYLNE NPLRALYLIA TNGTPELQNP 240
241 EKLSAIFRDF LNRCLDMDVE KRGSAKELLQ HQFLKIAKPL SSLTPLIAAA KEATKNNH
|
| Detection Method: | |
| Confidence: | 86.0 |
| Match: | 1f3mC |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
