Protein: | APOC3 |
Organism: | Homo sapiens |
Length: | 99 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APOC3.
Description | E-value | Query Range |
Subject Range |
|
3.0E-34 | [1..99] | [1..99] |
|
5.0E-34 | [1..99] | [1..99] |
|
9.0E-34 | [1..99] | [1..99] |
|
3.0E-32 | [1..95] | [1..95] |
|
7.0E-32 | [1..96] | [1..96] |
|
6.0E-31 | [21..99] | [1..79] |
|
1.0E-30 | [1..99] | [1..99] |
Region A: Residues: [1-99] |
1 11 21 31 41 51 | | | | | | 1 MQPRVLLVVA LLALLASARA SEAEDASLLS FMQGYMKHAT KTAKDALSSV QESQVAQQAR 60 61 GWVTDGFSSL KDYWSTVKDK FSEFWDLDPE VRPTSAVAA |
Detection Method: | ![]() |
Confidence: | 71.619789 |
Match: | PF05778.3 |
Description: | No description for PF05778.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.831 | N/A | N/A | a.112.1 | Description not found. |
View | Download | 0.786 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
View | Download | 0.780 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
View | Download | 0.730 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
View | Download | 0.728 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |