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View Structure Prediction Details

Protein: PMAIP1
Organism: Homo sapiens
Length: 54 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMAIP1.

Description E-value Query
Range
Subject
Range
gi|109122354 - gi|109122354|ref|XP_001091088.1| PREDICTED: similar to phorbol-12-myristate-13-acetate-induced prote...
106.0 [0..1] [54..147]
gi|11276046, gi|... - gi|47523386|ref|NP_999312.1| phorbol-12-myristate-13-acetate-induced protein 1 [Sus scrofa], gi|1127...
94.0 [0..1] [54..121]
APR_CANLF - Phorbol-12-myristate-13-acetate-induced protein 1 OS=Canis lupus familiaris GN=PMAIP1 PE=3 SV=1
86.0 [0..1] [54..1]
APR_MOUSE - Phorbol-12-myristate-13-acetate-induced protein 1 OS=Mus musculus GN=Pmaip1 PE=1 SV=1
79.0 [0..1] [54..50]
APR_RAT - Phorbol-12-myristate-13-acetate-induced protein 1 OS=Rattus norvegicus GN=Pmaip1 PE=3 SV=1
72.0 [0..1] [54..50]

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Predicted Domain #1
Region A:
Residues: [1-54]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGKKARKNA QPSPARAPAE LEVECATQLR RFGDKLNFRQ KLLNLISKLF CSGT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.777 a.140.6 Description not found.
View Download 0.577 a.140.3 Rho termination factor, N-terminal domain
View Download 0.510 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.484 a.140.2 SAP domain
View Download 0.477 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.450 a.140.4 Recombination endonuclease VII, C-terminal and dimerization domains
View Download 0.445 a.140.2 SAP domain
View Download 0.431 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.394 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain


YRC Informatics Platform - Version 3.0
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