YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PIGV
Organism: Homo sapiens
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIGV.

Description E-value Query
Range
Subject
Range
gi|26338704 - gi|26338704|dbj|BAC33023.1| unnamed protein product [Mus musculus]
0.0 [5..493] [62..550]
gi|7020604 - gi|7020604|dbj|BAA91196.1| unnamed protein product [Homo sapiens]
0.0 [1..493] [1..493]
gi|108999752, gi... - gi|108999767|ref|XP_001110160.1| PREDICTED: similar to phosphatidylinositol glycan class V isoform 1...
0.0 [1..493] [1..493]
PIGV_RAT - GPI mannosyltransferase 2 OS=Rattus norvegicus GN=Pigv PE=2 SV=1
0.0 [5..493] [5..492]
gi|76611283 - gi|76611283|ref|XP_597427.2| PREDICTED: similar to phosphatidylinositol glycan class V [Bos taurus]
0.0 [1..493] [1..493]
gi|57043249 - gi|57043249|ref|XP_535346.1| PREDICTED: similar to phosphatidylinositol glycan class V [Canis famili...
0.0 [1..493] [1..493]

Back

Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPQDPSRKE VLRFAVSCRI LTLMLQALFN AIIPDHHAEA FSPPRLAPSG FVDQLVEGLL  60
   61 GGLSHWDAEH FLFIAEHGYL YEHNFAFFPG FPLALLVGTE LLRPLRGLLS LRSCLLISVA 120
  121 SLNFLFFMLA AVALHDLGCL VLHCPHQSFY AALLFCLSPA NVFLAAGYSE ALFALLTFSA 180
  181 MGQLERGRVW TSVLLFAFAT GVRSNGLVSV GFLMHSQCQG FFSSLTMLNP LRQLFKLMAS 240
  241 LFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [244-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVFTLGLPFA LFQYYAYTQF CLPGSARPIP EPLVQLAVDK GYRIAEGNEP PWCFWDVPLI  60
   61 YSYIQDVYWN VGFLKYYELK QVPNFLLAAP VAILVAWATW TYVTTHPWLC LTLGLQRSKN 120
  121 NKTLEKPDLG FLSPQVFVYV VHAAVLLLFG GLCMHVQVLT RFLGSSTPIM YWFPAHLLQD 180
  181 QEPLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [429-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSLKTVPWKP LAEDSPPGQK VPRNPIMGLL YHWKTCSPVT RYILGYFLTY WLLGLLLHCN  60
   61 FLPWT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle