Protein: | RL3_PHOPR |
Organism: | Photobacterium profundum |
Length: | 209 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL3_PHOPR.
Description | E-value | Query Range |
Subject Range |
|
306.0 | [0..1] | [209..1] |
Region A: Residues: [1-209] |
1 11 21 31 41 51 | | | | | | 1 MIGLIGRKVG MTRIFTEEGI SIPVTVVEVE ANRVTQVKSL ETDGYNAIQI TTGTKKANRV 60 61 SKPAAGHFAK AGVEAGRGLW EFRLENGEEF AVGAELNVEL FNEVKKVDVT GTSKGKGFQG 120 121 VIKRWNFSTQ DMTHGNSLSH RAPGSIGQCQ TPGRVFKGKK MAGHMGAERV TTQNLEIVRV 180 181 DAERNLLLIK GAVPGSIGGN VIVKPAVKA |
Detection Method: | |
Confidence: | 80.221849 |
Match: | 1p85B |
Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
structural constituent of ribosome | 8.74976995123472 | bayes_pls_golite062009 |
structural molecule activity | 8.17182185344538 | bayes_pls_golite062009 |
translation initiation factor activity | 2.68619850021832 | bayes_pls_golite062009 |
translation regulator activity | 2.20347076721097 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 2.18748808024313 | bayes_pls_golite062009 |
nucleic acid binding | 1.73237871506838 | bayes_pls_golite062009 |
binding | 1.44145316612405 | bayes_pls_golite062009 |
peptidyltransferase activity | 1.25473146071242 | bayes_pls_golite062009 |
RNA binding | 0.798696391797967 | bayes_pls_golite062009 |
protein binding | 0.449435758237719 | bayes_pls_golite062009 |