| Protein: | gi|115458196, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1011 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115458196, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
1065.0 | [0..1] | [1011..1] |
|
|
810.0 | [0..63] | [939..107] |
|
|
743.0 | [0..65] | [941..91] |
|
|
331.0 | [0..588] | [934..146] |
|
|
329.0 | [0..588] | [934..6] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MEAEPPPENR HDDHHPSTSG GGLGYFHLRL LCPAAPLLLL LRSDRLYSLS LSRRRGPRLR 60
61 LLASPRRRHG RRRRALLLST SGCALRLTHR SSSADAVRVN GRPLLRGGCP ADLAVGDEVS 120
121 LLRRGTRYGF LVEKFVSCER PKLAAAEPCG EVLVLRAESL RKRLRAISES HDPLSFLRDS 180
181 HCVENGSDDV RVKKAREEDV FL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [203-386] |
1 11 21 31 41 51
| | | | | |
1 PLNLNAPIDP VAVEGLLRED CNLGQGKLEH CTDSAIAKNE TDELIQRSKG SCDGNTEQKE 60
61 YSNENTEQQH NENEGCYSDG STFFLNRLIG IGSDMRVEQR SGVTLPQLLH PMDSLERVFI 120
121 ATFTSDVSWF LDYCKVPQNL PVTIACHNKE RCWSASRESR TAAPFGSYPN LLLVYPQFPE 180
181 EIAF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [387-551] |
1 11 21 31 41 51
| | | | | |
1 GKDRKKQGVA CHHPKLLVLQ RKDSMRVIVT SANLVPRQWH LITNTVWWQD FPCRTSTDYS 60
61 ALFSKVEESK SDFATQLVSF IAFLINEVPS QSYWINEIAK YNFEGAAGYL IASVPGIYAR 120
121 NPHYLESNYC LSRKQILHTK SAHRMFLGSV QTSVVGLSHR FHIPS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [552-1011] |
1 11 21 31 41 51
| | | | | |
1 DAGSKLKALS VLLSKCHVNM HGTTEVILKR NTNIPADANA VSVLVADLDK FTEEDSVHLG 60
61 FLPREVAKWV SPLSDLGFFT FSGFIYPREA LEAAYGATNT KVQLLLYVSK GPEFSQISRL 120
121 IQDEHFPLLC SLVASLKRSL GLWRLEEVLS HFKWPETLET DFFYSASSIG TSINPQFIAS 180
181 FASAAGKRCN QDLDSEESDP EWGCWTANHE LKKPSINLLF PTIDRVKNGA CGIQLSRHLL 240
241 SLPERTWQRL RSTGIFRDAI PHPYERIGHP MHVKVAQRRF ESRLGRHSFG WTYCGSHNFS 300
301 PAAWGQQLPP PKANPTEARA VSSGPRLHIC NYELGIILII PPSAMSKQIS GRRHEINDIV 360
361 LPFVVPPPQY KLGDRPATSL AMREAMAEAR ILQSNDLVLD LSQDTDEDIP DEDDEHVIEL 420
421 SDCSPEEKEE EKIYAETLWE QVDSSQRPGW PVKLKSRCFG
|
| Detection Method: | |
| Confidence: | 90.045757 |
| Match: | 1qzqA |
| Description: | human Tyrosyl DNA phosphodiesterase |
Matching Structure (courtesy of the PDB): |
|
