| Protein: | gi|113565698, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113565698, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..3] | [428..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MDMVREEAWP LAAPQQQQQQ PSAPPPQPQA QQQNGRIDLR EVKLQLEKRL GPDRSRRYFS 60
61 YLKGYLSNRL SKADFDKVCL QTLGRENLRV HNQLIRSVLY NAYHAKCPPP TPAPDVGRSV 120
121 GATVKKV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-287] |
1 11 21 31 41 51
| | | | | |
1 CQPGEALNSC NGDIRLLQMQ GSRHMSTMQD HQSKDRMKST GLSCRVDASA NHSQITHGGA 60
61 AVPENGTLSS SDLKRSVHFQ HESAEPLAKH QRVEQSPTGN IIKLRRSMSN VSDHSAEASN 120
121 SPVRAPLGIP FCSASVGGAR KLPPPLISAG EDHCTSCCEH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [288-428] |
1 11 21 31 41 51
| | | | | |
1 RELLNTEALH RRMEKTAESL GLAGVTLDCA DLLNNGLDKY LKNLIRSSVE LIGANVQSDA 60
61 RKGELYKQHA YGKHMNGVWL PNHVQMQSGS GPSGATNDIR NHHLISLDDF KVAMQLNPQQ 120
121 LGEDWPVLLE KICLCSPEEN D
|
| Detection Method: | |
| Confidence: | 1.16 |
| Match: | 1h3oA |
| Description: | TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.455107270213523 | bayes_pls_golite062009 |
