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View Structure Prediction Details

Protein: gi|115478062, gi...
Organism: Oryza sativa Japonica Group
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115478062, gi....

Description E-value Query
Range
Subject
Range
gi|21593518 - gi|21593518|gb|AAM65485.1| putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana]
332.0 [0..1] [351..1]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQQLGYCW VLLIALLSCS AATASEVPAI IVFGDSTVDA GNNNYILTVA KGNFPPYGRD  60
   61 FDGGVATGRF SNGRLVTDFV SEALGLPSSV PAYLDSTYTI DQLATGVSFA SGGTGLDSLT 120
  121 ARVVSVIPLS QQLEYFKEYI EKLKQAKGED VANEIITEAL YVFSIGTNDF IINYFNLPLR 180
  181 RAVYTTAEYT AYLVGEAAAA VRDTHELGAH KIIFAGLAPI GCLPSARTLN HDAPGECNEE 240
  241 HSQVAVAFNT ALTEAIGKLN DELTGLRVVY SDTYSVLSAI LSNPSYYGFV NIAQGCCGTG 300
  301 LIETSVLCGF NDHLTCQDAN SYVFFDSVHP SERTYQIIAN KIINTDLKLV L

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.22
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle