Protein: | DME_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 1987 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for DME_ARATH.
Region A: Residues: [1-245] |
1 11 21 31 41 51 | | | | | | 1 MNSRADPGDR YFRVPLENQT QQEFMGSWIP FTPKKPRSSL MVDERVINQD LNGFPGGEFV 60 61 DRGFCNTGVD HNGVFDHGAH QGVTNLSMMI NSLAGSHAQA WSNSERDLLG RSEVTSPLAP 120 121 VIRNTTGNVE PVNGNFTSDV GMVNGPFTQS GTSQAGYNEF ELDDLLNPDQ MPFSFTSLLS 180 181 GGDSLFKVRQ YGPPACNKPL YNLNSPIRRE AVGSVCESSF QYVPSTPSLF RTGEKTGFLE 240 241 QIVTT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [246-318] |
1 11 21 31 41 51 | | | | | | 1 TGHEIPEPKS DKSMQSIMDS SAVNATEATE QNDGSRQDVL EFDLNKTPQQ KPSKRKRKFM 60 61 PKVVVEGKPK RKP |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [319-443] |
1 11 21 31 41 51 | | | | | | 1 RKPAELPKVV VEGKPKRKPR KAATQEKVKS KETGSAKKKN LKESATKKPA NVGDMSNKSP 60 61 EVTLKSCRKA LNFDLENPGD ARQGDSESEI VQNSSGANSF SEIRDAIGGT NGSFLDSVSQ 120 121 IDKTN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [444-649] |
1 11 21 31 41 51 | | | | | | 1 GLGAMNQPLE VSMGNQPDKL STGAKLARDQ QPDLLTRNQQ CQFPVATQNT QFPMENQQAW 60 61 LQMKNQLIGF PFGNQQPRMT IRNQQPCLAM GNQQPMYLIG TPRPALVSGN QQLGGPQGNK 120 121 RPIFLNHQTC LPAGNQLYGS PTDMHQLVMS TGGQQHGLLI KNQQPGSLIR GQQPCVPLID 180 181 QQPATPKGFT HLNQMVATSM SSPGLR |
Detection Method: | |
Confidence: | 3.69897 |
Match: | 1m2vB |
Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [650-871] |
1 11 21 31 41 51 | | | | | | 1 PHSQSQVPTT YLHVESVSRI LNGTTGTCQR SRAPAYDSLQ QDIHQGNKYI LSHEISNGNG 60 61 CKKALPQNSS LPTPIMAKLE EARGSKRQYH RAMGQTEKHD LNLAQQIAQS QDVERHNSST 120 121 CVEYLDAAKK TKIQKVVQEN LHGMPPEVIE IEDDPTDGAR KGKNTASISK GASKGNSSPV 180 181 KKTAEKEKCI VPKTPAKKGR AGRKKSVPPP AHASEIQLWQ PT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [872-947] |
1 11 21 31 41 51 | | | | | | 1 PPKTPLSRSK PKGKGRKSIQ DSGKARGPSG ELLCQDSIAE IIYRMQNLYL GDKEREQEQN 60 61 AMVLYKGDGA LVPYES |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [948-1141] |
1 11 21 31 41 51 | | | | | | 1 KKRKPRPKVD IDDETTRIWN LLMGKGDEKE GDEEKDKKKE KWWEEERRVF RGRADSFIAR 60 61 MHLVQGDRRF SPWKGSVVDS VIGVFLTQNV SDHLSSSAFM SLAARFPPKL SSSREDERNV 120 121 RSVVVEDPEG CILNLNEIPS WQEKVQHPSD MEVSGVDSGS KEQLRDCSNS GIERFNFLEK 180 181 SIQNLEEEVL SSQD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1142-1267] |
1 11 21 31 41 51 | | | | | | 1 SFDPAIFQSC GRVGSCSCSK SDAEFPTTRC ETKTVSGTSQ SVQTGSPNLS DEICLQGNER 60 61 PHLYEGSGDV QKQETTNVAQ KKPDLEKTMN WKDSVCFGQP RNDTNWQTTP SSSYEQCATR 120 121 QPHVLD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1268-1416] |
1 11 21 31 41 51 | | | | | | 1 IEDFGMQGEG LGYSWMSISP RVDRVKNKNV PRRFFRQGGS VPREFTGQII PSTPHELPGM 60 61 GLSGSSSAVQ EHQDDTQHNQ QDEMNKASHL QKTFLDLLNS SEECLTRQSS TKQNITDGCL 120 121 PRDRTAEDVV DPLSNNSSLQ NILVESNSS |
Detection Method: | |
Confidence: | 40.69897 |
Match: | 1hu0A |
Description: | 8-oxoguanine glycosylase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [1417-1805] |
1 11 21 31 41 51 | | | | | | 1 NKEQTAVEYK ETNATILREM KGTLADGKKP TSQWDSLRKD VEGNEGRQER NKNNMDSIDY 60 61 EAIRRASISE ISEAIKERGM NNMLAVRIKD FLERIVKDHG GIDLEWLRES PPDKAKDYLL 120 121 SIRGLGLKSV ECVRLLTLHN LAFPVDTNVG RIAVRMGWVP LQPLPESLQL HLLELYPVLE 180 181 SIQKFLWPRL CKLDQRTLYE LHYQLITFGK VFCTKSRPNC NACPMRGECR HFASAYASAR 240 241 LALPAPEERS LTSATIPVPP ESYPPVAIPM IELPLPLEKS LASGAPSNRE NCEPIIEEPA 300 301 SPGQECTEIT ESDIEDAYYN EDPDEIPTIK LNIEQFGMTL REHMERNMEL QEGDMSKALV 360 361 ALHPTTTSIP TPKLKNISRL RTEHQVYEL |
Detection Method: | |
Confidence: | 79.221849 |
Match: | 1rrqA |
Description: | MutY adenine glycosylase in complex with DNA containing an A:oxoG pair |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [1806-1987] |
1 11 21 31 41 51 | | | | | | 1 PDSHRLLDGM DKREPDDPSP YLLAIWTPGE TANSAQPPEQ KCGGKASGKM CFDETCSECN 60 61 SLREANSQTV RGTLLIPCRT AMRGSFPLNG TYFQVNELFA DHESSLKPID VPRDWIWDLP 120 121 RRTVYFGTSV TSIFRGLSTE QIQFCFWKGF VCVRGFEQKT RAPRPLMARL HFPASKLKNN 180 181 KT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.