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View Structure Prediction Details

Protein: MRPS35
Organism: Homo sapiens
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS35.

Description E-value Query
Range
Subject
Range
gi|26346603, gi|... - gi|74215198|dbj|BAE41824.1| unnamed protein product [Mus musculus], gi|26346603|dbj|BAC36950.1| unna...
0.0 [1..322] [1..319]
gi|34858606, gi|... - gi|34858606|ref|XP_216306.2| PREDICTED: similar to mitochondrial ribosomal protein S35 [Rattus norve...
0.0 [1..322] [1..319]
gi|39794221 - gi|39794221|gb|AAH63515.1| MRPS35 protein [Homo sapiens]
0.0 [3..323] [1..321]
gi|109096009 - gi|109096009|ref|XP_001103832.1| PREDICTED: similar to mitochondrial ribosomal protein S35 [Macaca m...
0.0 [1..323] [1..323]
RT35_BOVIN - 28S ribosomal protein S35, mitochondrial OS=Bos taurus GN=MRPS35 PE=1 SV=1
0.0 [1..322] [1..324]
gi|73997238 - gi|73997238|ref|XP_534855.2| PREDICTED: similar to mitochondrial ribosomal protein S35 [Canis famili...
0.0 [1..322] [1..350]
CE21666 - status:Partially_confirmed UniProt:Q9NEI6 protein_id:CAB61063.1
0.0 [17..322] [59..363]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAALPAWL SLQSRARTLR AFSTAVYSAT PVPTPSLPER TPGNERPPRR KALPPRTEKM  60
   61 AVDQDWPSVY PVAAPFKPSA VPLPVRMGYP VKKGVPMAKE GNLELLKIPN FLHLT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVAIKKHCEA LKDFCTEWPA ALDSDEKCEK HFPIEIDSTD YVSSGPSVRN PRARVVVLRV  60
   61 KLSSLNLDDH AKKKLIKLVG ERYCKTTDVL TIKTDRCPLR RQNYDYAVYL LTVLYHESWN 120
  121 TEEWEKSKTE ADMEEYIWEN SSSERNILET LLQMKAAEKN MEINKEELLG TKEIEEYKKS 180
  181 VVSLKNEEEN ENSISQYKES VKRLLNVT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.972
Match: 2jvaA
Description: No description for 2jvaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle