| Protein: | gi|14043299 |
| Organism: | Homo sapiens |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14043299.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..310] | [2..311] |
|
|
0.0 | [1..310] | [2..311] |
|
|
0.0 | [1..310] | [2..308] |
|
|
0.0 | [1..310] | [2..309] |
|
|
0.0 | [1..310] | [2..311] |
|
Region A: Residues: [1-240] |
1 11 21 31 41 51
| | | | | |
1 HPAGLAAAAA GTPRLPSKRR IPVSQPGMAD PHQLFDDTSS AQSRGYGAQR APGGLSYPAA 60
61 SPTPHAAFLA DPVSNMAMAY GSSLAAQGKE LVDKNIDRFI PITKLKYYFA VDTMYVGRKL 120
121 GLLFFPYLHQ DWEVQYQQDT PVAPRFDVNA PDLYIPAMAF ITYVLVAGLA LGTQDRFSPD 180
181 LLGLQASSAL AWLTLEVLAI LLSLYLVTVN TDLTTIDLVA FLGYKYVGMI GGVLMGLLFG 240
241
|
| Detection Method: |  |
| Confidence: | 0.976 |
| Match: | 1dx0A |
| Description: | Prion protein domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.22514585792228 | bayes_pls_golite062009 |
| tubulin binding | 1.96726329576357 | bayes_pls_golite062009 |
| protein binding | 1.76565398252144 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.71860571490508 | bayes_pls_golite062009 |
| microtubule binding | 1.7070745359784 | bayes_pls_golite062009 |
|
Region A: Residues: [241-310] |
1 11 21 31 41 51
| | | | | |
1 KIGYYLVLGW CCVAIFVFMI RTLRLKILAD AAAEGVPVRG ARNQLRMYLT MAVAAAQPML 60
61 MYWLTFHLVR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
