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View Structure Prediction Details

Protein: gi|108705819, gi...
Organism: Oryza sativa Japonica Group
Length: 661 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108705819, gi....

Description E-value Query
Range
Subject
Range
gi|108705820 - gi|108705820|gb|ABF93615.1| expressed protein [Oryza sativa (japonica cultivar-group)]
752.0 [0..1] [661..1]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLTPTQR YAAGALLALA LRQAQIHQSV LLGAHHHHDD DDEEQGRTST SSGGGGGSSS  60
   61 SSSNSGAGAD ADLWTHDSHG LLRPVFRFLE IDPKAWSGLE ETAASSEAKH HIGAFLRIIF 120
  121 EEDGESSSDR SVQELALAKG VDVMVMSLGN DSEVGNTIKG GDQDALPSSS GTDKSPGESS 180
  181 HDDQLGINKL TLDDIPANNH RKMALLFA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [209-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLSACVADKP VSQEEEDRKS TRFRKGYDAR HRVALRLLST WLDVKWIKME AIEVMVACSA  60
   61 MAAAKEQEQS QESASPKSKW EKWKRGGIIG AAALTGGALL AITGGLAAPA IAAGFGALAP 120
  121 TLGTLVPVIG ASGFAAMATA AGSVAGSVAV AASFGAAGAG LTGSKMARRI GSVKEFEFKP 180
  181 IGENHNQGRL AVGILISGFA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [409-661]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDEDDFCRPW EGWQDNLERY ILQWESKHII AVSTAIQDWL TSRLAMELMK QGAMRTVLSG  60
   61 LLAAFAWPAT LLAATDFIDS KWSVAIDRSD KAGKMLAEVL LKGLQGNRPV TLIGFSLGAR 120
  121 VIFKCLQELA LSSDNEGLVE RVVLLGAPVS VKGERWEAAR KMVAGRFVNV YSTDDWILGV 180
  181 TFRASLLTQG LAGIQAIDVP GVENVDVTEL VDGHSSYLSA AQQILEHLEL NTYYPVFVPL 240
  241 SAANEETDGT VAQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle