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View Structure Prediction Details

Protein: gi|215712281, gi...
Organism: Oryza sativa Japonica Group
Length: 783 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215712281, gi....

Description E-value Query
Range
Subject
Range
gi|108706529 - gi|108706529|gb|ABF94324.1| SacIy domain containing protein, expressed [Oryza sativa (japonica culti...
891.0 [0..1] [783..1]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMAGDKFL QKFRLYETRS KFYLIGRDKT RTLWRVLKID RMEPTELEIE EDHTSYTENE  60
   61 CQELLWRIHE GNRLTGGLKF VTKCYGIVGF IKFLGPYYMV LITRRRKVGT ICSHEIYSVG 120
  121 KSELIAIPSP IVWPNVAYSR DENRYKRLLC SVDLSKDFFF SYSYNIMRSL QKNITDKNTG 180
  181 QV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYETMFVWNE FLSRAIRNHL KNTTWTVALI HGFFKQSKLS VAGKEFWLTL IARRSRHFAG  60
   61 TRFLKRGVNE KGRVANDVET EQIVFEDTPD EIPHQISSVV QHRGSIPLIW FQETSRLNIR 120
  121 PDIILKPDVD YKTTRLHFEN LALRYGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [330-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIIILNLIKT REKKPRESLL RAEFAKAIHY INKGLPDDKR LKFLHMDLSK LSRRKGTNVL  60
   61 SLLNKVASDV LDLTDFLHCE ITTSKYEDAS SGQGAVANSG DIENIQDQNL CATKLVPLLL 120
  121 QKGVLRTNCI DCLDRTNVAQ FAYGLAALGR QLHVLQLNET PTIE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [494-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHAPLADDLM DFYERMGDTL AIQYGGSAAH NKIFCEQRGQ WKAATQSQEF LRTLQRYYSN  60
   61 AYTDPEKQDS INVFLGHFQP QEGKPALWKL DSDQHYN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [591-783]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGRQGTLTEE TGRSFIKRSL SDGNILCDNT GGPVSDCNVG KNNTSSELLP MQPLEDIREP  60
   61 SDSAPEISIE PNPCSSTNYS TLSGRHSISE ERQNYLRRLG YPELHSSNFL DLDLLSSSGN 120
  121 SCEEEIYERS SLINSPMDVV SIESTTSYSE QGHNDEQGRD DTDLSRSSSQ MSDIRDYSDR 180
  181 FTHWVDGGGM LCY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle