| Protein: | gi|108864208 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 858 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108864208.
| Description | E-value | Query Range |
Subject Range |
|
|
948.0 | [0..1] | [858..1] |
|
|
758.0 | [0..2] | [856..39] |
|
|
751.0 | [0..3] | [846..432] |
|
|
741.0 | [0..2] | [857..24] |
|
|
725.0 | [0..2] | [848..39] |
|
|
723.0 | [0..2] | [856..41] |
|
|
706.0 | [0..2] | [839..191] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MDMLMLSSAL DGLDSYTDLV AGSSVADSIF SALTCFPPSQ ERLLHVSTPV GSNSRQDDSD 60
61 VSITKEGTTT RRGDCAAGLA SGEPVAAGIG SVPKPFDGVT LTERMLRALA MLKEASG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-267] |
1 11 21 31 41 51
| | | | | |
1 GEAILVQVWM PVRNGEQHVL TTSDQPFLLD QKLTGYREVS RQFTFSAEEG PGLFPGLPGR 60
61 VFMSGMPEWT SNVMYYHGSE YLRVDYARRH EVRGSLAMPV FNSSGGSCCA VLEVVMTREK 120
121 DNFCLEMVNV SNALQSVQLS TVNAWRHSQS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-507] |
1 11 21 31 41 51
| | | | | |
1 YSRDQKLALM EIFDVLQAVC QAHLLPLALA WIPVCSKRDV LVSVEYGANF GKRNKEVLCI 60
61 EESACYVNDT RMRDFVQVCA EHPLEKGQGV AGNAYLSNNP FFSSDVKDYD MHAYPLVNHA 120
121 RKFGLHAAVA IRLQSTYTKN DDYVLEFFLP VLCKGGGEQQ LLLDSISATM RRVCKSLRTV 180
181 SDAELKEDVT RKPSNENRSG TRCPSPVNLI YSGREIDVSN ETKTNTPLEY QIEGIDEQLS 240
241
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [508-631] |
1 11 21 31 41 51
| | | | | |
1 DTKSTNKLIK CSNASDGEKR RSSTEKSVSL SVLQQYFSGS LKDAAKSIGV CPTTLKRICR 60
61 QHGISRWPSR KIKKVNRSLK KIQNVISSVH GVEGVLKYDP STGCLVSSVS PSIEPVLMNV 120
121 EHKG
|
| Detection Method: | |
| Confidence: | 30.167491 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [632-755] |
1 11 21 31 41 51
| | | | | |
1 QDVLHKLQNK QNGEINFDMD DGELFRNSHS TRTLSGAFCE DMPNGLYVAR EMTCVAKTGT 60
61 RTERLEHKPS SRDSFSAPQE YRMESETDKS NKNSKQSLPS SSSMTDCSTS SGETFKSIKS 120
121 QSAN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [756-858] |
1 11 21 31 41 51
| | | | | |
1 ESNKTVVVKA SYKNDTIRFK LLPSMKYEQL LEEIAKRLKL SIGLFQLKYK DDEGDWVILA 60
61 SDADLQECLE ILDTTRLRIL KLQVQDVVCP IGSSSGSCSM LRP
|
| Detection Method: | |
| Confidence: | 21.39794 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
