| Protein: | gi|108864210 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 886 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108864210.
| Description | E-value | Query Range |
Subject Range |
|
|
944.0 | [0..1] | [886..1] |
|
|
762.0 | [0..2] | [883..24] |
|
|
753.0 | [0..2] | [884..39] |
|
|
750.0 | [0..3] | [874..432] |
|
|
749.0 | [0..2] | [878..39] |
|
|
734.0 | [0..2] | [884..41] |
|
|
734.0 | [0..2] | [867..191] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MDMLMLSSAL DGLDSYTDLV AGSSVADSIF SALTCFPPSQ ERLLHVSTPV GSNSRQDDSD 60
61 VSITKEGTTT RRGDCAAGLA SGEPVAAGIG SVPKPFDGVT LTERMLRALA MLKEASGGEA 120
121 ILVQVWMPVR N
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [132-263] |
1 11 21 31 41 51
| | | | | |
1 GEQHVLTTSD QPFLLDQKLT GYREVSRQFT FSAEEGPGLF PGLPGRVFMS GMPEWTSNVM 60
61 YYHGSEYLRV DYARRHEVRG SLAMPVFNSS GGSCCAVLEV VMTREKDNFC LEMVNVSNAL 120
121 QSVQLSTVNA WR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [264-451] |
1 11 21 31 41 51
| | | | | |
1 HSQSYSRDQK LALMEIFDVL QAVCQAHLLP LALAWIPVCS KRDVLVSVEY GANFGKRNKE 60
61 VLCIEESACY VNDTRMRDFV QVCAEHPLEK GQGVAGNAYL SNNPFFSSDV KDYDMHAYPL 120
121 VNHARKFGLH AAVAIRLQST YTKNDDYVLE FFLPVLCKGG GEQQLLLDSI SATMRRVCKS 180
181 LRTVSDAE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [452-519] |
1 11 21 31 41 51
| | | | | |
1 LKEDVTRKPS NENRSGTRCP SPVNLIYSGR EIDVSNETKT NTPLEYQIEG IDEQLSDTKS 60
61 TNKLIKCS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [520-649] |
1 11 21 31 41 51
| | | | | |
1 NASDGEKRRS STEKSVSLSV LQQYFSGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI 60
61 KKVNRSLKKI QNVISSVHGV EGVLKYDPST GCLVSSVSPS IEPVLMNVEH KGSDPLPIES 120
121 ELPHLNFEPD
|
| Detection Method: | |
| Confidence: | 30.167491 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [650-780] |
1 11 21 31 41 51
| | | | | |
1 CDAYRREHAG QDVLHKLQNK QNGEINFDMD DGELFRNSHS TRTLSGAFCE DMPNGLYVAR 60
61 EMTCVAKTGT RTERLEHKPS SRDSFSAPQE YRMESETDKS NKNSKQSLPS SSSMTDCSTS 120
121 SGETFKSIKS Q
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [781-886] |
1 11 21 31 41 51
| | | | | |
1 SANESNKTVV VKASYKNDTI RFKLLPSMKY EQLLEEIAKR LKLSIGLFQL KYKDDEGDWV 60
61 ILASDADLQE CLEILDTTRL RILKLQVQDV VCPIGSSSGS CSMLRP
|
| Detection Method: | |
| Confidence: | 22.30103 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
