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View Structure Prediction Details

Protein: TNG2_MOUSE
Organism: Mus musculus
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TNG2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|109451848, gi... - gi|109451848|emb|CAK54795.1| C22orf25 [synthetic construct], gi|109451270|emb|CAK54496.1| C22orf25 [...
HGNC:25439|Ensem... - 22 open reading frame 25
C22orf25 - chromosome 22 open reading frame 25
445.0 [0..1] [276..1]
gi|74219739, gi|... - gi|74227275|dbj|BAE21736.1| unnamed protein product [Mus musculus], gi|74219739|dbj|BAE40462.1| unna...
436.0 [0..1] [276..1]
gi|73995915 - gi|73995915|ref|XP_850154.1| PREDICTED: similar to Ser/Thr-rich protein T10 in DGCR region [Canis fa...
431.0 [0..1] [276..1]
gi|149019786, gi... - gi|62658192|ref|XP_341011.2| PREDICTED: similar to Ser/Thr-rich protein T10 in DGCR region [Rattus n...
429.0 [0..1] [276..1]
TNG2_BOVIN - Transport and Golgi organization protein 2 homolog OS=Bos taurus GN=TANGO2 PE=2 SV=1
414.0 [0..1] [276..1]
gi|56119064, gi|... - gi|56119064|ref|NP_001007837.1| hypothetical protein LOC416784 [Gallus gallus], gi|53136540|emb|CAG3...
399.0 [0..1] [274..1]
gi|52345676, gi|... - gi|52345676|ref|NP_001004885.1| MGC88919 protein [Xenopus (Silurana) tropicalis], gi|49522958|gb|AAH...
389.0 [0..1] [275..1]
gi|39645613, gi|... - gi|39645613|gb|AAH63724.1| MGC68627 protein [Xenopus laevis], gi|148228476|ref|NP_001083694.1| hypot...
387.0 [0..1] [275..1]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCIIFFKFDP RPVSKNAYRL ILAANRDEFY NRPSKLADFW GNNSEILSGL DMEEGKAGGT  60
   61 WLGISTRGKL GALTNYLQPR QEPDARGRGE LVSHFLTSDM DSLSYLKKVS TEGHLYNGFN 120
  121 IIAADLSTSK GDVVCYYGNR GEPEPIVLTP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.249 N/A N/A d.60.1 Probable bacterial effector-binding domain

Predicted Domain #2
Region A:
Residues: [151-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTYGLSNALL ETPWKKLCFG KQLFMEAVEQ SEALPKDVLV TQLLDVLNNE EAQLPDPAIE  60
   61 DQGQEYVQPI LNKYAAVWCR CASYGTRTNT IILVDANGHV TFTERSMLDK DTSRWETNTY 120
  121 EFTLQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.758 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.703 N/A N/A a.24.4 Hemerythrin
View Download 0.665 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.658 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.647 N/A N/A a.182.1 GatB/YqeY domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle