Protein: | baz-PB |
Organism: | Drosophila melanogaster |
Length: | 1520 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for baz-PB.
Description | E-value | Query Range |
Subject Range |
|
686.0 | [0..61] | [1520..40] |
Region A: Residues: [1-127] |
1 11 21 31 41 51 | | | | | | 1 MFDVPPKCPA LANKLGGLFG WRHTYKVAAK QEGIPHGQLH KSYSLTLPKR PPSPSTYSCV 60 61 KPDSWVTVTH LQTQSGILDP DDCVRDVADD REQILAHFDD PGPDPGVPQG GGDGASGSSS 120 121 VGTGSPD |
Detection Method: | |
Confidence: | 18.69897 |
Match: | 2dazA |
Description: | No description for 2dazA was found. |
Region A: Residues: [128-328] |
1 11 21 31 41 51 | | | | | | 1 IFRDPTNTEA PTCPRDLSTP HIEVTSTTSG PMAGLGVGLM VRRSSDPNLL ASLKAEGSNK 60 61 RWSAAAPHYA GGDSPERLFL DKAGGQLSPQ WEEDDDPSHQ LKEQLLHQQQ PHAANGGSSS 120 121 GNHQPFARSG RLSMQFLGDG NGYKWMEAAE KLQNQPPAQQ TYQQGSHHAG HGQNGAYSSK 180 181 SLPRESKRKE PLGQAYESIR E |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [329-424] |
1 11 21 31 41 51 | | | | | | 1 KDGEMLLIIN EYGSPLGLTA LPDKEHGGGL LVQHVEPGSR AERGRLRRDD RILEINGIKL 60 61 IGLTESQVQE QLRRALESSE LRVRVLRGDR NRRQQR |
Detection Method: | |
Confidence: | 19.69897 |
Match: | 1iu0A |
Description: | Synaptic protein PSD-95 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
cytoskeletal protein binding | 3.8598579619264 | bayes_pls_golite062009 |
actin binding | 2.68527541003929 | bayes_pls_golite062009 |
binding | 2.6196222853442 | bayes_pls_golite062009 |
protein binding | 2.35875654816667 | bayes_pls_golite062009 |
actin filament binding | 1.28158096626765 | bayes_pls_golite062009 |
receptor binding | 1.19273986711251 | bayes_pls_golite062009 |
transporter activity | 1.14862709059264 | bayes_pls_golite062009 |
transmembrane transporter activity | 1.03502943752333 | bayes_pls_golite062009 |
beta-catenin binding | 0.740091060781601 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.724101421194961 | bayes_pls_golite062009 |
cyclase inhibitor activity | 0.719523854982412 | bayes_pls_golite062009 |
guanylate cyclase inhibitor activity | 0.719523854982412 | bayes_pls_golite062009 |
PDZ domain binding | 0.71844819286977 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 0.520243659117793 | bayes_pls_golite062009 |
cell adhesion molecule binding | 0.403457741099606 | bayes_pls_golite062009 |
protein domain specific binding | 0.30840185305841 | bayes_pls_golite062009 |
ErbB-2 class receptor binding | 0.261656236234201 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.221504678128513 | bayes_pls_golite062009 |
molecular transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
signal transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
Region A: Residues: [425-550] |
1 11 21 31 41 51 | | | | | | 1 DSKVAEMVEV ATVSPTRKPH AAPVGTSLQV ANTRKLGRKI EIMLKKGPNG LGFSVTTRDN 60 61 PAGGHCPIYI KNILPRGAAI EDGRLKPGDR LLEVDGTPMT GKTQTDVVAI LRGMPAGATV 120 121 RIVVSR |
Detection Method: | |
Confidence: | 25.0 |
Match: | 2fneA |
Description: | The crystal structure of the 13th PDZ domain of MPDZ |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [551-661] |
1 11 21 31 41 51 | | | | | | 1 QQELAEQADQ PAEKSAGVAV APSVAPPAVP AAAAPAPPIP VQKSSSARSL FTHQQQSQLN 60 61 ESQHFIDAGS ESAASNDSLP PSSNSWHSRE ELTLHIPVHD TEKAGLGVSV K |
Detection Method: | |
Confidence: | 3.35 |
Match: | 2iwqA |
Description: | No description for 2iwqA was found. |
Region A: Residues: [662-923] |
1 11 21 31 41 51 | | | | | | 1 GKTCSNLNAS GSSASSGSNG LMKHDGDLGI FVKNVIHGGA ASRDGRLRMN DQLLSVNGVS 60 61 LRGQNNAEAM ETLRRAMVNT PGKHPGTITL LVGRKILRSA SSSDILDHSN SHSHSHSNSS 120 121 GGSNSNGSGN NNNSSSNASD NSGATVIYLS PEKREQRCNG GGGGGSAGNE MNRWSNPVLD 180 181 RLTGGICSSN SAQPSSQQSH QQQPHPSQQQ QQQRRLPAAP VCSSAALRNE SYYMATNDNW 240 241 SPAQMHLMTA HGNTALLIED DA |
Detection Method: | |
Confidence: | 3.97 |
Match: | 1z87A |
Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [924-999] |
1 11 21 31 41 51 | | | | | | 1 EPMSPTLPAR PHDGQHCNTS SANPSQNLAV GNQGPPINTV PGTPSTSSNF DATYSSQLSL 60 61 ETNSGVEHFS RDALGR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1000-1186] |
1 11 21 31 41 51 | | | | | | 1 RSISEKHHAA LDARETGTYQ RNKKLREERE RERRIQLTKS AVYGGSIESL TARIASANAQ 60 61 FSGYKHAKTA SSIEQRETQQ QLAAAEAEAR DQLGDLGPSL GMKKSSSLES LQTMVQELQM 120 121 SDEPRGHQAL RAPRGRGRED SLRAAVVSEP DASKPRKTWL LEDGDHEGGF ASQRNGPFQS 180 181 SLNDGKH |
Detection Method: | |
Confidence: | 32.09691 |
Match: | 1kjwA |
Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [1187-1324] |
1 11 21 31 41 51 | | | | | | 1 GCKSSRAKKP SILRGIGHMF RFGKNRKDGV VPVDNYAVNI SPPTSVVSTA TSPQLQQQQQ 60 61 QQLQQHQQQQ QIPTAALAAL ERNGKPPAYQ PPPPLPAPNG VGSNGIHQND IFNHRYQHYA 120 121 NYEDLHQQHQ QHQISGGD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1325-1520] |
1 11 21 31 41 51 | | | | | | 1 STTSISETLS ESTLECMRQQ VIRQRIKVEA ESRRHQHYHS QRSARSQDVS MHSTSSGSQP 60 61 GSLAQPQAQS NGVRPMSSYY EYETVQQQRV GSIKHSHSSS ATSSSSSPIN VPHWKAAAMN 120 121 GYSPASLNSS ARSRGPFVTQ VTIREQSSGG IPAHLLQQHQ QQQLQQQQPT YQTVQKMSGP 180 181 SQYGSAAGSQ PHASKV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.