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View Structure Prediction Details

Protein: Dscam-PBE
Organism: Drosophila melanogaster
Length: 2031 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PBE.

Description E-value Query
Range		 Subject
Range
Dscam-PL - The gene Down syndrome cell adhesion molecule is referred to in FlyBase by the symbol Dmel\Dscam (CG...
 1529.0 [0..3] [2031..3]

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Predicted Domain #1
Region A:
Residues: [1-138] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE  60
   61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
  121 NQFGSIISRD VHVRAVVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.0
Match: 2v5sA
Description: No description for 2v5sA was found.

Predicted Domain #2
Region A:
Residues: [139-235] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QFYEAEIMTE YVIRGNAAVL KCSIPSFVAD FVRVESWIDD EGNVLSFSDN YDGKYLVLPS  60
   61 GELHIREVGP EDGYKSYQCR TKHRLTGETR LSATKGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 2ec8A
Description: No description for 2ec8A was found.

Predicted Domain #3
Region A:
Residues: [236-895] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVITEPVGSV RPKVNPQDKH QFIDVELASS YSLLCMAQSY PTPSFRWYKF IEGTTRKQAV  60
   61 VLNDRVKQVS GTLIIKDAVV EDSGKYLCVV NNSVGGESVE TVLTVTAPLS AKIDPPTQTV 120
  121 DFGRPAVFTC QYTGNPIKTV SWMKDGKAIG HSEPVLRIES VKKEDKGMYQ CFVRNDQESA 180
  181 EASAELKLGG RFDPPVIRQA FQEETMEPGP SVFLKCVAGG NPTPEISWEL DGKKIANNDR 240
  241 YQVGQYVTVN GDVVSYLNIT SVHANDGGLY KCIAKSKVGV AEHSAKLNVY GLPYIRQMEK 300
  301 KAIVAGETLI VTCPVAGYPI DSIVWERDNR ALPINRKQKV FPNGTLIIEN VERNSDQATY 360
  361 TCVAKNQEGY SARGSLEVQV MVLPRIIPFA FEEGPAQVGQ YLTLHCSVPG GDLPLNIDWT 420
  421 LDGQAISEDL GITTSRVGRR GSVLTIEAVE ASHAGNFTCH ARNLAGHQQF TTPLNVYVPP 480
  481 RWILEPTDKA FAQGSDAKVE CKADGFPKPQ VTWKKAVGDT PGEYKDLKKS DNIRVEEGTL 540
  541 HVDNIQKTNE GYYLCEAING IGSGLSAVIM ISVQAPPEFT EKLRNQTARR GEPAVLQCEA 600
  601 KGEKPIGILW NMNNMRLDPK NDNRYTIREE ILSTGVMSSL SIKRTERSDS ALFTCVATNA 660
  661

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 1e07A
Description: Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [896-1012] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGSDDASINM IVQEVPEMPY ALKVLDKSGR SVQLSWAQPY DGNSPLDRYI IEFKRSRASW  60
   61 SEIDRVIVPG HTTEAQVQKL SPATTYNIRI VAENAIGTSQ SSEAVTIITA EEAPSGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.39794
Match: 2nziA
Description: No description for 2nziA was found.

Predicted Domain #5
Region A:
Residues: [1013-1109] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQNIKVEPVN QTTMRVTWKP PPRTEWNGEI LGYYVGYKLS NTNSSYVFET INFITEEGKE  60
   61 HNLELQNLRV YTQYSVVIQA FNKIGAGPLS EEEKQFT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.154902
Match: 2edxA
Description: No description for 2edxA was found.

Predicted Domain #6
Region A:
Residues: [1110-1213] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEGTPSQPPS DTACTTLTSQ TIRVGWVSPP LESANGVIKT YKVVYAPSDE WYDETKRHYK  60
   61 KTASSDTVLH GLKKYTNYTM QVLATTAGGD GVRSVPIHCQ TEPD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.0
Match: 1x5hA
Description: The solution structure of the third fibronectin type III domain of human Neogenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
telethonin binding 5.81747667416248 bayes_pls_golite062009
structural constituent of muscle 5.71979489668015 bayes_pls_golite062009
transmembrane receptor activity 4.81256300373074 bayes_pls_golite062009
ankyrin binding 4.69755754047169 bayes_pls_golite062009
receptor activity 4.66147271961356 bayes_pls_golite062009
alpha-actinin binding 4.57951951779666 bayes_pls_golite062009
actinin binding 4.57900103206288 bayes_pls_golite062009
cytokine binding 4.43581512268554 bayes_pls_golite062009
cytokine receptor activity 4.08668869714207 bayes_pls_golite062009
growth factor binding 4.06808996928726 bayes_pls_golite062009
molecular transducer activity 3.69234048247377 bayes_pls_golite062009
signal transducer activity 3.69234048247377 bayes_pls_golite062009
extracellular matrix structural constituent 3.5949595622742 bayes_pls_golite062009
protein binding 3.24522318184038 bayes_pls_golite062009
binding 3.12471204223368 bayes_pls_golite062009
receptor binding 2.38673889309915 bayes_pls_golite062009
interleukin-2 binding 2.38131482184802 bayes_pls_golite062009
cell adhesion molecule binding 2.32179186005318 bayes_pls_golite062009
peptide hormone binding 2.12033076929638 bayes_pls_golite062009
axon guidance receptor activity 2.01367445237355 bayes_pls_golite062009
interleukin-6 receptor activity 1.9781930293417 bayes_pls_golite062009
interleukin-6 binding 1.9781930293417 bayes_pls_golite062009
prolactin receptor activity 1.9556649101819 bayes_pls_golite062009
mercury ion binding 1.85843060232985 bayes_pls_golite062009
cytoskeletal protein binding 1.85720106085239 bayes_pls_golite062009
glycosaminoglycan binding 1.56410665522466 bayes_pls_golite062009
myosin light chain kinase activity 1.49217960276915 bayes_pls_golite062009
protein kinase activity 1.42856560840953 bayes_pls_golite062009
cytokine receptor binding 1.37111932405391 bayes_pls_golite062009
nucleic acid binding 1.32813363771214 bayes_pls_golite062009
transcription regulator activity 1.31663344632755 bayes_pls_golite062009
ciliary neurotrophic factor receptor activity 1.27192437373177 bayes_pls_golite062009
actin binding 1.21472460452555 bayes_pls_golite062009
DNA binding 1.2006039770643 bayes_pls_golite062009
cytokine activity 1.18680139050127 bayes_pls_golite062009
growth hormone receptor activity 1.15929762138929 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.15899955607967 bayes_pls_golite062009
heparin binding 1.15000556789505 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.12142142875217 bayes_pls_golite062009
kinase activity 1.11027658115625 bayes_pls_golite062009
sialic acid binding 0.992369242781511 bayes_pls_golite062009
interleukin-7 binding 0.992216255634359 bayes_pls_golite062009
structural molecule activity 0.94240190391222 bayes_pls_golite062009
protease binding 0.942107032692451 bayes_pls_golite062009
peptide binding 0.92031154055894 bayes_pls_golite062009
protein dimerization activity 0.86564366658585 bayes_pls_golite062009
interleukin-2 receptor activity 0.817385502041609 bayes_pls_golite062009
interleukin-11 receptor activity 0.721156833238761 bayes_pls_golite062009
interleukin-11 binding 0.721156833238761 bayes_pls_golite062009
protein serine/threonine kinase activity 0.703490254739121 bayes_pls_golite062009
kinase binding 0.65927255037265 bayes_pls_golite062009
cell surface binding 0.630081242528945 bayes_pls_golite062009
leukemia inhibitory factor receptor activity 0.628488391922279 bayes_pls_golite062009
oncostatin-M receptor activity 0.628488391922279 bayes_pls_golite062009
enzyme binding 0.60195860585095 bayes_pls_golite062009
collagen binding 0.593745877718282 bayes_pls_golite062009
identical protein binding 0.564711394496051 bayes_pls_golite062009
transcription factor activity 0.557290274937694 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 0.554350228628563 bayes_pls_golite062009
polysaccharide binding 0.54737137289904 bayes_pls_golite062009
hormone binding 0.49524185948356 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.46168925186147 bayes_pls_golite062009
growth factor activity 0.432629984792427 bayes_pls_golite062009
structural constituent of cytoskeleton 0.40600177052491 bayes_pls_golite062009
protein kinase binding 0.405060010394646 bayes_pls_golite062009
monosaccharide binding 0.356315624949755 bayes_pls_golite062009
ciliary neurotrophic factor receptor binding 0.338520586013721 bayes_pls_golite062009
pattern binding 0.31156427047296 bayes_pls_golite062009
protein heterodimerization activity 0.1430595594485 bayes_pls_golite062009
transcription activator activity 0.135753557343301 bayes_pls_golite062009
actin filament binding 0.135484838710405 bayes_pls_golite062009
protein homodimerization activity 0.116391819218123 bayes_pls_golite062009
integrin binding 0.0873424694168858 bayes_pls_golite062009
transcription factor binding 0.075900818564989 bayes_pls_golite062009

Predicted Domain #7
Region A:
Residues: [1214-1306] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPEAPTDVKA LVMGNAAILV SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF  60
   61 EATELEKNKP YEFWVTASTT IGEGQQSKSI VAM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 1tdqA
Description: Structural basis for the interactions between tenascins and the C-type lectin domains from lecticans: evidence for a cross-linking role for tenascins
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
telethonin binding 5.81747667416248 bayes_pls_golite062009
structural constituent of muscle 5.71979489668015 bayes_pls_golite062009
transmembrane receptor activity 4.81256300373074 bayes_pls_golite062009
ankyrin binding 4.69755754047169 bayes_pls_golite062009
receptor activity 4.66147271961356 bayes_pls_golite062009
alpha-actinin binding 4.57951951779666 bayes_pls_golite062009
actinin binding 4.57900103206288 bayes_pls_golite062009
cytokine binding 4.43581512268554 bayes_pls_golite062009
cytokine receptor activity 4.08668869714207 bayes_pls_golite062009
growth factor binding 4.06808996928726 bayes_pls_golite062009
molecular transducer activity 3.69234048247377 bayes_pls_golite062009
signal transducer activity 3.69234048247377 bayes_pls_golite062009
extracellular matrix structural constituent 3.5949595622742 bayes_pls_golite062009
protein binding 3.24522318184038 bayes_pls_golite062009
binding 3.12471204223368 bayes_pls_golite062009
receptor binding 2.38673889309915 bayes_pls_golite062009
interleukin-2 binding 2.38131482184802 bayes_pls_golite062009
cell adhesion molecule binding 2.32179186005318 bayes_pls_golite062009
peptide hormone binding 2.12033076929638 bayes_pls_golite062009
axon guidance receptor activity 2.01367445237355 bayes_pls_golite062009
interleukin-6 receptor activity 1.9781930293417 bayes_pls_golite062009
interleukin-6 binding 1.9781930293417 bayes_pls_golite062009
prolactin receptor activity 1.9556649101819 bayes_pls_golite062009
mercury ion binding 1.85843060232985 bayes_pls_golite062009
cytoskeletal protein binding 1.85720106085239 bayes_pls_golite062009
glycosaminoglycan binding 1.56410665522466 bayes_pls_golite062009
myosin light chain kinase activity 1.49217960276915 bayes_pls_golite062009
protein kinase activity 1.42856560840953 bayes_pls_golite062009
cytokine receptor binding 1.37111932405391 bayes_pls_golite062009
nucleic acid binding 1.32813363771214 bayes_pls_golite062009
transcription regulator activity 1.31663344632755 bayes_pls_golite062009
ciliary neurotrophic factor receptor activity 1.27192437373177 bayes_pls_golite062009
actin binding 1.21472460452555 bayes_pls_golite062009
DNA binding 1.2006039770643 bayes_pls_golite062009
cytokine activity 1.18680139050127 bayes_pls_golite062009
growth hormone receptor activity 1.15929762138929 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.15899955607967 bayes_pls_golite062009
heparin binding 1.15000556789505 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.12142142875217 bayes_pls_golite062009
kinase activity 1.11027658115625 bayes_pls_golite062009
sialic acid binding 0.992369242781511 bayes_pls_golite062009
interleukin-7 binding 0.992216255634359 bayes_pls_golite062009
structural molecule activity 0.94240190391222 bayes_pls_golite062009
protease binding 0.942107032692451 bayes_pls_golite062009
peptide binding 0.92031154055894 bayes_pls_golite062009
protein dimerization activity 0.86564366658585 bayes_pls_golite062009
interleukin-2 receptor activity 0.817385502041609 bayes_pls_golite062009
interleukin-11 receptor activity 0.721156833238761 bayes_pls_golite062009
interleukin-11 binding 0.721156833238761 bayes_pls_golite062009
protein serine/threonine kinase activity 0.703490254739121 bayes_pls_golite062009
kinase binding 0.65927255037265 bayes_pls_golite062009
cell surface binding 0.630081242528945 bayes_pls_golite062009
leukemia inhibitory factor receptor activity 0.628488391922279 bayes_pls_golite062009
oncostatin-M receptor activity 0.628488391922279 bayes_pls_golite062009
enzyme binding 0.60195860585095 bayes_pls_golite062009
collagen binding 0.593745877718282 bayes_pls_golite062009
identical protein binding 0.564711394496051 bayes_pls_golite062009
transcription factor activity 0.557290274937694 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 0.554350228628563 bayes_pls_golite062009
polysaccharide binding 0.54737137289904 bayes_pls_golite062009
hormone binding 0.49524185948356 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.46168925186147 bayes_pls_golite062009
growth factor activity 0.432629984792427 bayes_pls_golite062009
structural constituent of cytoskeleton 0.40600177052491 bayes_pls_golite062009
protein kinase binding 0.405060010394646 bayes_pls_golite062009
monosaccharide binding 0.356315624949755 bayes_pls_golite062009
ciliary neurotrophic factor receptor binding 0.338520586013721 bayes_pls_golite062009
pattern binding 0.31156427047296 bayes_pls_golite062009
protein heterodimerization activity 0.1430595594485 bayes_pls_golite062009
transcription activator activity 0.135753557343301 bayes_pls_golite062009
actin filament binding 0.135484838710405 bayes_pls_golite062009
protein homodimerization activity 0.116391819218123 bayes_pls_golite062009
integrin binding 0.0873424694168858 bayes_pls_golite062009
transcription factor binding 0.075900818564989 bayes_pls_golite062009

Predicted Domain #8
Region A:
Residues: [1307-1599] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSDQVPAKIA SFDDTFTATF KEDAKMPCLA VGAPQPEITW KIKGVEFSAN DRMRVLPDGS  60
   61 LLIKSVNRQD AGDYSCHAEN SIAKDSITHK LIVLAPPQSP HVTLSATTTD ALTVKLKPHE 120
  121 GDTAPLHGYT LHYKPEFGEW ETSEVSVDSQ KHNIEGLLCG SRYQVYATGF NNIGAGEASD 180
  181 ILNTRTKGQK PKLPEKPRFI EVSSNSVSLH FKAWKDGGCP MSHFVVESKK RDQIEWNQIS 240
  241 NNVKPDNNYV VLDLEPATWY NLRITAHNSA GFTVAEYDFA TLTVTGGTIA PLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.39794
Match: 1n26A
Description: Interleukin-6 receptor alpha chain, N-teminal domain; Interleukin-6 receptor alpha chain, domains 2 and 3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
telethonin binding 5.81747667416248 bayes_pls_golite062009
structural constituent of muscle 5.71979489668015 bayes_pls_golite062009
fibroblast growth factor 1 binding 5.4404326675665 bayes_pls_golite062009
transmembrane receptor activity 4.81256300373074 bayes_pls_golite062009
ankyrin binding 4.69755754047169 bayes_pls_golite062009
fibroblast growth factor binding 4.68443966623746 bayes_pls_golite062009
receptor activity 4.66147271961356 bayes_pls_golite062009
alpha-actinin binding 4.57951951779666 bayes_pls_golite062009
actinin binding 4.57900103206288 bayes_pls_golite062009
cytokine binding 4.43581512268554 bayes_pls_golite062009
olfactory receptor activity 4.21057154107121 bayes_pls_golite062009
cytokine receptor activity 4.08668869714207 bayes_pls_golite062009
growth factor binding 4.06808996928726 bayes_pls_golite062009
antigen binding 4.06466268219034 bayes_pls_golite062009
molecular transducer activity 3.69234048247377 bayes_pls_golite062009
signal transducer activity 3.69234048247377 bayes_pls_golite062009
peptide antigen binding 3.67780971105726 bayes_pls_golite062009
extracellular matrix structural constituent 3.5949595622742 bayes_pls_golite062009
protein binding 3.24522318184038 bayes_pls_golite062009
binding 3.12471204223368 bayes_pls_golite062009
IgG binding 2.62006935586983 bayes_pls_golite062009
receptor binding 2.38673889309915 bayes_pls_golite062009
interleukin-2 binding 2.38131482184802 bayes_pls_golite062009
cell adhesion molecule binding 2.32179186005318 bayes_pls_golite062009
peptide hormone binding 2.12033076929638 bayes_pls_golite062009
axon guidance receptor activity 2.01367445237355 bayes_pls_golite062009
interleukin-6 binding 1.9781930293417 bayes_pls_golite062009
interleukin-6 receptor activity 1.9781930293417 bayes_pls_golite062009
prolactin receptor activity 1.9556649101819 bayes_pls_golite062009
mercury ion binding 1.85843060232985 bayes_pls_golite062009
cytoskeletal protein binding 1.85720106085239 bayes_pls_golite062009
IgE binding 1.73481096568834 bayes_pls_golite062009
IgE receptor activity 1.73481096568834 bayes_pls_golite062009
glycosaminoglycan binding 1.56410665522466 bayes_pls_golite062009
myosin light chain kinase activity 1.49217960276915 bayes_pls_golite062009
protein kinase activity 1.42856560840953 bayes_pls_golite062009
cytokine receptor binding 1.37111932405391 bayes_pls_golite062009
nucleic acid binding 1.32813363771214 bayes_pls_golite062009
transcription regulator activity 1.31663344632755 bayes_pls_golite062009
ciliary neurotrophic factor receptor activity 1.27192437373177 bayes_pls_golite062009
fibroblast growth factor receptor activity 1.24730237107473 bayes_pls_golite062009
actin binding 1.21472460452555 bayes_pls_golite062009
DNA binding 1.2006039770643 bayes_pls_golite062009
cytokine activity 1.18680139050127 bayes_pls_golite062009
growth hormone receptor activity 1.15929762138929 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.15899955607967 bayes_pls_golite062009
heparin binding 1.15000556789505 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.12142142875217 bayes_pls_golite062009
kinase activity 1.11027658115625 bayes_pls_golite062009
G-protein coupled receptor activity 1.02428106476324 bayes_pls_golite062009
sialic acid binding 0.992369242781511 bayes_pls_golite062009
interleukin-7 binding 0.992216255634359 bayes_pls_golite062009
structural molecule activity 0.94240190391222 bayes_pls_golite062009
protease binding 0.942107032692451 bayes_pls_golite062009
peptide binding 0.92031154055894 bayes_pls_golite062009
protein dimerization activity 0.86564366658585 bayes_pls_golite062009
interleukin-2 receptor activity 0.817385502041609 bayes_pls_golite062009
immunoglobulin receptor activity 0.803684061893919 bayes_pls_golite062009
interleukin-11 receptor activity 0.721156833238761 bayes_pls_golite062009
interleukin-11 binding 0.721156833238761 bayes_pls_golite062009
protein serine/threonine kinase activity 0.703490254739121 bayes_pls_golite062009
kinase binding 0.65927255037265 bayes_pls_golite062009
immunoglobulin binding 0.64138121404685 bayes_pls_golite062009
cell surface binding 0.630081242528945 bayes_pls_golite062009
leukemia inhibitory factor receptor activity 0.628488391922279 bayes_pls_golite062009
oncostatin-M receptor activity 0.628488391922279 bayes_pls_golite062009
enzyme binding 0.60195860585095 bayes_pls_golite062009
titin binding 0.599892148302011 bayes_pls_golite062009
collagen binding 0.593745877718282 bayes_pls_golite062009
identical protein binding 0.564711394496051 bayes_pls_golite062009
transcription factor activity 0.557290274937694 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 0.554350228628563 bayes_pls_golite062009
polysaccharide binding 0.54737137289904 bayes_pls_golite062009
IgG receptor activity 0.50231877534761 bayes_pls_golite062009
myosin heavy chain binding 0.49788128784685 bayes_pls_golite062009
hormone binding 0.49524185948356 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.46168925186147 bayes_pls_golite062009
growth factor activity 0.432629984792427 bayes_pls_golite062009
structural constituent of cytoskeleton 0.40600177052491 bayes_pls_golite062009
protein kinase binding 0.405060010394646 bayes_pls_golite062009
monosaccharide binding 0.356315624949755 bayes_pls_golite062009
ciliary neurotrophic factor receptor binding 0.338520586013721 bayes_pls_golite062009
pattern binding 0.31156427047296 bayes_pls_golite062009
protein heterodimerization activity 0.1430595594485 bayes_pls_golite062009
transcription activator activity 0.135753557343301 bayes_pls_golite062009
actin filament binding 0.135484838710405 bayes_pls_golite062009
protein homodimerization activity 0.116391819218123 bayes_pls_golite062009
integrin binding 0.0873424694168858 bayes_pls_golite062009
transcription factor binding 0.075900818564989 bayes_pls_golite062009

Predicted Domain #9
Region A:
Residues: [1600-1843] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGSGHGNVHT RIRLPAWMPE WLDLNFMVPL IATVVVVAVG ICVVCVALSR RRADDMRGGQ  60
   61 KDVYYDVVYN QTMGPGATLD KRRPDLRDEL GYIAPPNRKL PPVPGSNYNT CDRIKRGRGG 120
  121 LRSNHSTWDP RRNPNLYEEL KAPPVPMHGN HYGHAHGNAE CHYRHPGMED EICPYATFHL 180
  181 LGFREEMDPT KAMNFQTFPH QNGHAGPVPG HAGTMLPPGH PGHVHSRSGS QSMPRANRYQ 240
  241 RKNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1844-2031] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGGQSSIYTP APEYDDPANC AEEDQYRRYT RVNSQGGSLY SGPGPEYDDP ANCAPEEDQY  60
   61 GSQYGGPYGQ PYDHYGSRGS MGRRSIGSAR NPGNGSPEPP PPPPRNHDMS NSSFNDSKES 120
  121 NEISEAECDR DHGPRGNYGA VKRSPQPKDQ RTTEEMRKLI ERNETGPKQL QLQQANGAGF 180
  181 TAYDTMAV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle