Protein: | Dscam-PAG |
Organism: | Drosophila melanogaster |
Length: | 2032 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAG.
Description | E-value | Query Range |
Subject Range |
|
1506.0 | [0..3] | [2032..3] |
Region A: Residues: [1-152] |
1 11 21 31 41 51 | | | | | | 1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60 61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120 121 NQFGSIISRD VHVRAVVNQF YGADILMEYV IR |
Detection Method: | |
Confidence: | 76.0 |
Match: | 2v5sA |
Description: | No description for 2v5sA was found. |
Region A: Residues: [153-242] |
1 11 21 31 41 51 | | | | | | 1 GNAAVLKCSI PSFVADFVRV ESWIDEEGTE LRPSENYDGK YLVLPSGELH IREVGPEDGY 60 61 KSYQCRTKHR LTGETRLSAT KGRLVITEPV |
Detection Method: | |
Confidence: | 12.0 |
Match: | 2ig2H |
Description: | Immunoglobulin heavy chain variable domain, VH; Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
telethonin binding | 6.64811984458494 | bayes_pls_golite062009 |
alpha-actinin binding | 5.77350124471385 | bayes_pls_golite062009 |
actinin binding | 5.69539760434923 | bayes_pls_golite062009 |
structural constituent of muscle | 4.93896503565413 | bayes_pls_golite062009 |
olfactory receptor activity | 4.21057154107121 | bayes_pls_golite062009 |
antigen binding | 4.06466268219034 | bayes_pls_golite062009 |
receptor activity | 4.00123250685257 | bayes_pls_golite062009 |
transmembrane receptor activity | 3.81769911097805 | bayes_pls_golite062009 |
binding | 3.17641566810715 | bayes_pls_golite062009 |
signal transducer activity | 3.10913345555941 | bayes_pls_golite062009 |
molecular transducer activity | 3.10913345555941 | bayes_pls_golite062009 |
peptide antigen binding | 2.94721224577771 | bayes_pls_golite062009 |
fibroblast growth factor 1 binding | 2.83860944503193 | bayes_pls_golite062009 |
growth factor binding | 2.28613301180608 | bayes_pls_golite062009 |
protein binding | 2.22855404705168 | bayes_pls_golite062009 |
extracellular matrix structural constituent | 1.97667893885412 | bayes_pls_golite062009 |
IgG binding | 1.92633562075074 | bayes_pls_golite062009 |
receptor binding | 1.70260377709721 | bayes_pls_golite062009 |
cytoskeletal protein binding | 1.58610597245454 | bayes_pls_golite062009 |
transmembrane receptor protein tyrosine kinase activity | 1.52958974617075 | bayes_pls_golite062009 |
actin binding | 1.42681407553255 | bayes_pls_golite062009 |
cell adhesion molecule binding | 1.36789541796983 | bayes_pls_golite062009 |
protein kinase activity | 1.36635494500222 | bayes_pls_golite062009 |
nucleic acid binding | 1.32330470851159 | bayes_pls_golite062009 |
transmembrane receptor protein kinase activity | 1.30657787244536 | bayes_pls_golite062009 |
fibroblast growth factor binding | 1.27793818082552 | bayes_pls_golite062009 |
fibroblast growth factor receptor activity | 1.24730237107473 | bayes_pls_golite062009 |
DNA binding | 1.19412627500732 | bayes_pls_golite062009 |
myosin light chain kinase activity | 1.17845072849922 | bayes_pls_golite062009 |
transcription regulator activity | 1.16252234499274 | bayes_pls_golite062009 |
G-protein coupled receptor activity | 1.02428106476324 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 1.02286631988334 | bayes_pls_golite062009 |
kinase activity | 0.929878054374821 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 0.878595022643164 | bayes_pls_golite062009 |
protein complex binding | 0.83543827718565 | bayes_pls_golite062009 |
actin filament binding | 0.760856470721016 | bayes_pls_golite062009 |
peptide binding | 0.729048089532569 | bayes_pls_golite062009 |
collagen binding | 0.635057461053063 | bayes_pls_golite062009 |
cytokine binding | 0.631436442105379 | bayes_pls_golite062009 |
titin binding | 0.599892148302011 | bayes_pls_golite062009 |
integrin binding | 0.599569390248921 | bayes_pls_golite062009 |
structural molecule activity | 0.567620977360967 | bayes_pls_golite062009 |
protein serine/threonine kinase activity | 0.564762108830441 | bayes_pls_golite062009 |
transcription factor activity | 0.54549168007511 | bayes_pls_golite062009 |
myosin heavy chain binding | 0.49788128784685 | bayes_pls_golite062009 |
cytokine receptor activity | 0.34165331857492 | bayes_pls_golite062009 |
protein tyrosine kinase activity | 0.318890055375093 | bayes_pls_golite062009 |
structural constituent of cytoskeleton | 0.0579247757286607 | bayes_pls_golite062009 |
Region A: Residues: [243-910] |
1 11 21 31 41 51 | | | | | | 1 GAKAPTFSLE YKLIEVQKSK GTAFALLCQA QAFPVPIIRW YKFIEGTTRK QAVVLNDRVK 60 61 QVSGTLIIKD AVVEDSGKYL CVVNNSVGGE SVETVLTVTA PLSAKIDPPT QTVDFGRPAV 120 121 FTCQYTGNPI KTVSWMKDGK AIGHSEPVLR IESVKKEDKG MYQCFVRNDQ ESAEASAELK 180 181 LGGRFDPPVI RQAFQEETME PGPSVFLKCV AGGNPTPEIS WELDGKKIAN NDRYQVGQYV 240 241 TVNGDVVSYL NITSVHANDG GLYKCIAKSK VGVAEHSAKL NVYGLPYIRQ MEKKAIVAGE 300 301 TLIVTCPVAG YPIDSIVWER DNRALPINRK QKVFPNGTLI IENVERNSDQ ATYTCVAKNQ 360 361 EGYSARGSLE VQVMVAPKIA PFDFGDEPSN FGESASVQCL VTSGDFPVSF AWLFNGREIN 420 421 ENVYDVSMVK LGKKISALSI DIVRDHHAGN YTCVAVNRAT SVNFTAELVV NVPPRWILEP 480 481 TDKAFAQGSD AKVECKADGF PKPQVTWKKA VGDTPGEYKD LKKSDNIRVE EGTLHVDNIQ 540 541 KTNEGYYLCE AINGIGSGLS AVIMISVQAP PEFTEKLRNQ TARRGEPAVL QCEAKGEKPI 600 601 GILWNMNNMR LDPKNDNRYT IREEILSTGV MSSLSIKRTE RSDSALFTCV ATNAFGSDDA 660 661 SINMIVQE |
Detection Method: | |
Confidence: | 58.221849 |
Match: | 1e07A |
Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [911-996] |
1 11 21 31 41 51 | | | | | | 1 VPEMPYALKV LDKSGRSVQL SWAQPYDGNS PLDRYIIEFK RSRASWSEID RVIVPGHTTE 60 61 AQVQKLSPAT TYNIRIVAEN AIGTSQ |
Detection Method: | |
Confidence: | 35.0 |
Match: | 2nziA |
Description: | No description for 2nziA was found. |
Region A: Residues: [997-1114] |
1 11 21 31 41 51 | | | | | | 1 SSEAVTIITA EEAPSGKPQN IKVEPVNQTT MRVTWKPPPR TEWNGEILGY YVGYKLSNTN 60 61 SSYVFETINF ITEEGKEHNL ELQNLRVYTQ YSVVIQAFNK IGAGPLSEEE KQFTAEGT |
Detection Method: | |
Confidence: | 9.39794 |
Match: | 2edxA |
Description: | No description for 2edxA was found. |
Region A: Residues: [1115-1214] |
1 11 21 31 41 51 | | | | | | 1 PSQPPSDTAC TTLTSQTIRV GWVSPPLESA NGVIKTYKVV YAPSDEWYDE TKRHYKKTAS 60 61 SDTVLHGLKK YTNYTMQVLA TTAGGDGVRS VPIHCQTEPD |
Detection Method: | |
Confidence: | 19.0 |
Match: | 1qg3A |
Description: | Integin beta-4 subunit |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [1215-1672] |
1 11 21 31 41 51 | | | | | | 1 VPEAPTDVKA LVMGNAAILV SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF 60 61 EATELEKNKP YEFWVTASTT IGEGQQSKSI VAMPSDQVPA KIASFDDTFT ATFKEDAKMP 120 121 CLAVGAPQPE ITWKIKGVEF SANDRMRVLP DGSLLIKSVN RQDAGDYSCH AENSIAKDSI 180 181 THKLIVLAPP QSPHVTLSAT TTDALTVKLK PHEGDTAPLH GYTLHYKPEF GEWETSEVSV 240 241 DSQKHNIEGL LCGSRYQVYA TGFNNIGAGE ASDILNTRTK GQKPKLPEKP RFIEVSSNSV 300 301 SLHFKAWKDG GCPMSHFVVE SKKRDQIEWN QISNNVKPDN NYVVLDLEPA TWYNLRITAH 360 361 NSAGFTVAEY DFATLTVTGG TIAPLDDGSG HGNVHTRIRL PAWMPEWLDL NFMVPLIATV 420 421 VVVAVGICVV CVALSRRRAD DMRGGQKDVY YDVVYNQT |
Detection Method: | |
Confidence: | 23.522879 |
Match: | 2v5yA |
Description: | No description for 2v5yA was found. |
Region A: Residues: [1673-1799] |
1 11 21 31 41 51 | | | | | | 1 MGPGATLDKR RPDLRDELGY IAPPNRKLPP VPGSNYNTCD RIKRGRGGLR SNHSTWDPRR 60 61 NPNLYEELKA PPVPMHGNHY GHAHGNAECH YRHPGMEDEI CPYATFHLLG FREEMDPTKA 120 121 MNFQTFP |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1800-2032] |
1 11 21 31 41 51 | | | | | | 1 HQNGHAGPVP GHAGTMLPPG HPGHVHSRSG SQSMPRANRY QRKNSQGGQS SIYTPAPEYD 60 61 DPANCAEEDQ YRRYTRVNSQ GGSLYSGPGP EYDDPANCAP EEDQYGSQYG GPYGQPYDHY 120 121 GSRGSMGRRS IGSARNPGNG SPEPPPPPPR NHDMSNSSFN DSKESNEISE AECDRDHGPR 180 181 GNYGAVKRSP QPKDQRTTEE MRKLIERNET GPKQLQLQQA NGAGFTAYDT MAV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.