YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG4467-PA
Organism: Drosophila melanogaster
Length: 1088 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4467-PA.

Description E-value Query
Range
Subject
Range
gi|33589406 - gi|33589406|gb|AAQ22470.1| RE31064p [Drosophila melanogaster]
697.0 [0..1] [1088..1]

Back

Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNDPDLDDC AFLSGGESSG GRQTRTGVAV CSQRRALLVA GIVLGSLLLT AIIIAYAGPQ  60
   61 NDCSCGSKTV SGYETDEENN TQPFNPIATN GEPFPWLEKM 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPTSVRPLRY MVTIHPNLTT LDVKGQVTID LHVEKETNFI VLHIQDLNVT EKAIVTPGPK  60
   61 GYALKIVKVL EFPPRQQLYI EVKERLKKKS NYTLNLRWYS KLN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.39
Match: 1hs6A
Description: Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [204-1088]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEPEGFYVDQ YESSNGVERL LAATVFRPNG ARRAFPCFDE PHVRAPFRIS VFRDRFHIGL  60
   61 SNSIVHTTED VGFYMGTGLL RDDFIETPPL PADAVAWVVS DFQRESLQPS AAYIPTTPAP 120
  121 PGSGVGGKKS AQLNNYTQLK GKNPPVRNIT ALTHSLNVNL TPRQNLTVVQ PTTTTAWPVN 180
  181 LNGNGKPSNL TSLSQSTGSS IKRAPSYTFY APRDLLIRSS FILHTSRDVL EYLQTWLDIS 240
  241 YPLTKVDFVA LPSLDRNMIS SLGLVTLKTS FLTDPSSITS EQYQFSALRI AEAMVRQFFG 300
  301 GITSRKVLKD VWLWEGLIQY LGIHALAPLQ ETWPLREMYL LKMATAALDI DAIQGWDSIM 360
  361 NGTSHDGNNE EFFVQKTAAI FSMLHTAIGE DRFRGCLGSF LKVNRFRTAE PTDLWTICTK 420
  421 KANGSKNIKD MMTLWTHQPG FPLLTVTKMG NSISISQRPF RPAEFLAIHD DSYDGNNYNK 480
  481 TTLNATDMPS TVATTTQGSK HKVAPHMKWI FPVTYVTDIN NVSETLWMQN VDVTFNVPEN 540
  541 VKWIKVNAIQ NGYYRVVYND DNWASLIEEL AANPNRFTSE DRLGMLSDAF TLCHANLLPC 600
  601 EITMNMIQYL PSETHYGPMA LALRHLEKWR RILKYSECFL MLSEFIKMKI STVMEKVGWS 660
  661 DDGDVATRLL RPEVLLASVL WEDIDSITKA KNMLNQYLYY NGTAIPPNLR EVVYTGSILS 720
  721 GEYIYWQHCW ERFVNLQRTS ETFVERMQLL RALGRTKDAW LQNRLLSHVT MLPTEEVVQV 780
  781 LKAIAGTPTG GAMACRFLQA KWFELEKRLG PGTISFAKVI SAITQYGATK FDYDELKSLV 840
  841 HRFGRGHGMS VLNMTLSSVA SNVEWVARSQ TSLYKWVEGN LHSHR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 155.0
Match: 2hpoA
Description: No description for 2hpoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle