| Protein: | REG3B_MOUSE |
| Organism: | Mus musculus |
| Length: | 175 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REG3B_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
154.0 | [0..1] | [173..1] |
|
|
154.0 | [0..1] | [174..1] |
|
|
154.0 | [0..1] | [173..1] |
|
|
151.0 | [0..5] | [172..1] |
|
|
149.0 | [0..1] | [175..6] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MLPPTACSVM SWMLLSCLML LSQVQGEDSL KNIPSARISC PKGSQAYGSY CYALFQIPQT 60
61 WFDAELACQK RPGGHLVSVL NSAEASFLSS MVKRTGNSYQ YTWIGLHDPT LGAEPNGGGW 120
121 EWSNNDVMNY FNWERNPSTA LDRAFCGSLS RASGFLKWRD MTCEVKLPYV CKFTG
|
| Detection Method: |  |
| Confidence: | 29.69897 |
| Match: | 1uv0A |
| Description: | Pancreatitis-associated protein 1 from human |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sugar binding | 5.35626613750458 | bayes_pls_golite062009 |
| monosaccharide binding | 3.98668897235502 | bayes_pls_golite062009 |
| sialic acid binding | 3.52479560815084 | bayes_pls_golite062009 |
| carbohydrate binding | 2.85222848359059 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.54910720573677 | bayes_pls_golite062009 |
| polysaccharide binding | 2.35704408824093 | bayes_pls_golite062009 |
| pattern binding | 2.08318151477871 | bayes_pls_golite062009 |
| growth factor activity | 2.0453811346021 | bayes_pls_golite062009 |
| binding | 2.03451078500546 | bayes_pls_golite062009 |
| receptor binding | 2.00166772827156 | bayes_pls_golite062009 |
| hyaluronic acid binding | 1.98794610872387 | bayes_pls_golite062009 |
| protein binding | 1.92861594281923 | bayes_pls_golite062009 |
| oligosaccharide binding | 1.5609945262091 | bayes_pls_golite062009 |
| heparin binding | 1.12629317075629 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 1.01437131878977 | bayes_pls_golite062009 |
| mannose binding | 0.861105897314574 | bayes_pls_golite062009 |
| integrin binding | 0.717993719687201 | bayes_pls_golite062009 |
| galactose binding | 0.6371384727372 | bayes_pls_golite062009 |
| receptor activity | 0.427193670352265 | bayes_pls_golite062009 |
| cell surface binding | 0.421177554796027 | bayes_pls_golite062009 |
| fucose binding | 0.2864673180945 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.0794028045607619 | bayes_pls_golite062009 |
