Protein: | NED1_SCHPO |
Organism: | Schizosaccharomyces pombe 972h- |
Length: | 656 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NED1_SCHPO.
Description | E-value | Query Range |
Subject Range |
|
871.0 | [0..1] | [649..1] |
|
818.0 | [0..1] | [604..1] |
|
816.0 | [0..1] | [604..1] |
|
788.0 | [0..1] | [594..1] |
|
786.0 | [0..1] | [589..1] |
|
774.0 | [0..1] | [639..1] |
|
755.0 | [0..1] | [592..1] |
|
730.0 | [0..1] | [590..1] |
|
727.0 | [0..1] | [648..1] |
|
725.0 | [0..1] | [594..1] |
Region A: Residues: [1-100] |
1 11 21 31 41 51 | | | | | | 1 MQYVGRAFDS VTKTWNAINP STLSGAIDVI VVEQEDKTLA CSPFHVRFGK FSLLLPSDKK 60 61 VEFSVNGQLT GFNMKLGDGG EAFFVFATEN AVPRELQTSP |
Detection Method: | |
Confidence: | 68.408935 |
Match: | PF04571.5 |
Description: | No description for PF04571.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.882 | 0.019 | ascospore formation | b.101.1 | Ribonuclease domain of colicin E3 |
Region A: Residues: [101-273] |
1 11 21 31 41 51 | | | | | | 1 IVSPTTSPKQ TPSINVTEPQ DLELDKVSQD HEKDQSNTYL MEDGYEFPLT RDLIRRSKSD 60 61 ADQTPPTGFK HLRHSSCLEM AGSDRTPSMP ATTLADLRLL QKAKELGKRL SGKELPTRVG 120 121 DNGDVMLDMT GYKSSAANIN IAELARETFK DEFPMIEKLL REDEEGNLWF HAS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [274-656] |
1 11 21 31 41 51 | | | | | | 1 EDAKKFAEVY GHSPPASPSR TPASPKSDSA LMDEDSDLSR RHSLSEQSLS PVSESYPQYA 60 61 KTLRLTSDQL RSLNLKPGKN ELSFGVNGGK AICTANLFFW KHNDPVVISD IDGTITKSDA 120 121 LGHMFTLIGK DWTHAGVAKL YTDITNNGYK IMYLTSRSVG QADSTRHYLR NIEQNGYSLP 180 181 DGPVILSPDR TMAALHREVI LRKPEVFKMA CLRDLCNIFA LPVPRTPFYA GFGNRITDAI 240 241 SYNHVRVPPT RIFTINSAGE VHIELLQRSG HRSSYVYMNE LVDHFFPPIE VSTRDEVSSF 300 301 TDVNFWRSPL LELSDEEEDD TNKSTSKSPK TPKNTKFGYQ EFEGIDEEDA QDYSPSPLIK 360 361 SFNELMFEGE EDEEGEEDVE NAV |
Detection Method: | |
Confidence: | 1.24 |
Match: | 2hlkA |
Description: | No description for 2hlkA was found. |